GPLIN_000170600 (Globodera pallida)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 GPLIN_000170600 T336331_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000170600 Sox 223 244
GPLIN_000170600 Sox 238 275

Links

Other Sox family TFs
Other Globodera pallida TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MCOS_0000664501 Mesocestoides corti MCOS_0000664501 N 0.588
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.582
BGIBMGA006156 Bombyx mori BGIBMGA006156 N 0.529
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.521
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.505
Hba_11463 Heterorhabditis bacteriophora Hba_11463 N 0.498
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N 0.490
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.488
Phatr3_J33840 Phaeodactylum tricornutum Phatr3_J33840 N 0.477
S40285_05706 Stachybotrys chlorohalonata S40285_05706 N 0.474
PAS_chr3_1149 Komagataella pastoris PAS_chr3_1149 N 0.472
XP_002492281.1 Pichia pastoris XP_002492281.1 N 0.472
NCLIV_023590 Neospora caninum NCLIV_023590 N 0.470
A1Q1_02593 Trichosporon asahii A1Q1_02593 N 0.469
HPODL_02662 Ogataea parapolymorpha HPODL_02662 N 0.469
RHTO_04537 Rhodosporidium toruloides RHTO_04537 N 0.468
Lus10016695.g Linum usitatissimum Lus10016695.g N 0.460
Lus10035991.g Linum usitatissimum Lus10035991.g N 0.460
MYCTH_2294733 Myceliophthora thermophila MYCTH_2294733 N 0.459
MPER_12197 Moniliophthora perniciosa MPER_12197 N 0.457
MVLG_01553 Microbotryum violaceum MVLG_01553 N 0.454
SAKL0C03872g Lachancea kluyveri SAKL0C03872g N 0.454
SAKL0C03916g Lachancea kluyveri SAKL0C03916g N 0.454
fgenesh2_pg.9_#_353 Fragilariopsis cylindrus fgenesh2_pg.9_#_353 N 0.453
SAKL0D09922g Lachancea kluyveri SAKL0D09922g N 0.453
Bo6g005800 Brassica oleracea Bo6g005800 N 0.452
K437DRAFT_266676 Tilletiaria anomala K437DRAFT_266676 N 0.451
PAS_chr1-1_0442 Komagataella pastoris PAS_chr1-1_0442 N 0.451
fgenesh1_pg.C_scaffold_11000089 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000089 N 0.451
XP_002490100.1 Pichia pastoris XP_002490100.1 N 0.451
Moror_8439 Moniliophthora roreri Moror_8439 N 0.448
Cla010647 Citrullus lanatus Cla010647 N 0.445
SCHCODRAFT_110960 Schizophyllum commune SCHCODRAFT_110960 N 0.443
GLOINDRAFT_9339 Rhizophagus irregularis GLOINDRAFT_9339 N 0.442
Bra012832 Brassica rapa Bra012832 N 0.441
Lus10013219.g Linum usitatissimum Lus10013219.g N 0.441
Lus10027787.g Linum usitatissimum Lus10027787.g N 0.440
Phatr3_J50240 Phaeodactylum tricornutum Phatr3_J50240 N 0.439
Thaps5285 Thalassiosira pseudonana Thaps5285 N 0.439
Thaps12024 Thalassiosira pseudonana Thaps12024 N 0.438
estExt_fgeneshTM_pg.C_10542 Tremella mesenterica estExt_fgeneshTM_pg.C_10542 N 0.437
Thaps11168 Thalassiosira pseudonana Thaps11168 N 0.436
LALA0_S10e00254g Lachancea lanzarotensis LALA0_S10e00254g N 0.433
MAM_05902 Metarhizium album MAM_05902 N 0.433
KUCA_T00004799001 Kuraishia capsulata KUCA_T00004799001 N 0.430
MAC_03708 Metarhizium acridum MAC_03708 N 0.430
MBR_01289 Metarhizium brunneum MBR_01289 N 0.430
PEQ_0000006801 Parascaris equorum PEQ_0000006801 N 0.428
TGME49_081900 Toxoplasma gondii TGME49_081900 N 0.427
Phatr3_J47350 Phaeodactylum tricornutum Phatr3_J47350 N 0.426
CMQ_7998 Grosmannia clavigera CMQ_7998 N 0.425
fgenesh2_pg.4_#_1036 Fragilariopsis cylindrus fgenesh2_pg.4_#_1036 N 0.424
Kwal_9519 Kluyveromyces waltii Kwal_9519 N 0.420
AWRI1499_2837 Brettanomyces bruxellensis AWRI1499_2837 N 0.419
CANTEDRAFT_114137 Candida tenuis CANTEDRAFT_114137 N 0.419
SAKL0C10648g Lachancea kluyveri SAKL0C10648g N 0.418
MDP0000699531 Malus domestica MDP0000699531 N 0.417
Ca_10726 Cicer arietinum Ca_10726 N 0.416
TCF7L2 Tursiops truncatus ENSTTRG00000002360 N 0.415
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.415
SAKL0H00726g Lachancea kluyveri SAKL0H00726g N 0.415
ASIS002444 Anopheles sinensis ASIS002444 N 0.415