CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCHCODRAFT_110960
(
Schizophyllum commune
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SCHCODRAFT_110960
T332445_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFI95858
Sox
97
123
LRRPQNAFILFRTHYLKGLRAREAAEQ
EFI95858
Sox
161
199
ALHQAANAWRAMSPAEREAFFEEARAAKARFVRELPAFV
Links
Other
Sox
family TFs
Other
Schizophyllum commune
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TSTA_110260
Talaromyces stipitatus
TSTA_110260
N
0.512
M407DRAFT_45069
Tulasnella calospora
M407DRAFT_45069
N
0.504
JAAARDRAFT_460099
Jaapia argillacea
JAAARDRAFT_460099
N
0.495
RHTO_04537
Rhodosporidium toruloides
RHTO_04537
N
0.486
BGIBMGA006156
Bombyx mori
BGIBMGA006156
N
0.482
fgenesh1_pg.C_scaffold_11000089
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_11000089
N
0.480
MVLG_01553
Microbotryum violaceum
MVLG_01553
N
0.475
SAKL0D09922g
Lachancea kluyveri
SAKL0D09922g
N
0.470
HelroG178674
Helobdella robusta
HelroG178674
N
0.467
HETIRDRAFT_460226
Heterobasidion irregulare
HETIRDRAFT_460226
N
0.466
estExt_Genewise1.C_120062
Heterobasidion annosum
estExt_Genewise1.C_120062
N
0.466
SAKL0C03872g
Lachancea kluyveri
SAKL0C03872g
N
0.466
SAKL0C03916g
Lachancea kluyveri
SAKL0C03916g
N
0.466
UCREL1_5722
Eutypa lata
UCREL1_5722
N
0.461
MCOS_0000664501
Mesocestoides corti
MCOS_0000664501
N
0.456
LALA0_S01e08702g
Lachancea lanzarotensis
LALA0_S01e08702g
N
0.452
estExt_fgeneshTM_pg.C_10542
Tremella mesenterica
estExt_fgeneshTM_pg.C_10542
N
0.452
SCHCODRAFT_105718
Schizophyllum commune
SCHCODRAFT_105718
N
0.450
Moror_8439
Moniliophthora roreri
Moror_8439
N
0.448
SAKL0C10648g
Lachancea kluyveri
SAKL0C10648g
N
0.448
PAS_chr1-1_0442
Komagataella pastoris
PAS_chr1-1_0442
N
0.447
XP_002490100.1
Pichia pastoris
XP_002490100.1
N
0.447
MAC_03708
Metarhizium acridum
MAC_03708
N
0.445
SINV25043
Solenopsis invicta
SINV25043
N
0.444
A1Q1_02593
Trichosporon asahii
A1Q1_02593
N
0.443
GPLIN_000170600
Globodera pallida
GPLIN_000170600
N
0.443
HPODL_02662
Ogataea parapolymorpha
HPODL_02662
N
0.441
MBR_01289
Metarhizium brunneum
MBR_01289
N
0.441
PAS_chr3_1149
Komagataella pastoris
PAS_chr3_1149
N
0.441
XP_002492281.1
Pichia pastoris
XP_002492281.1
N
0.441
MPER_12197
Moniliophthora perniciosa
MPER_12197
N
0.440
K437DRAFT_266676
Tilletiaria anomala
K437DRAFT_266676
N
0.439
CC1G_07855
Coprinopsis cinerea
CC1G_07855
N
0.432
CMQ_7998
Grosmannia clavigera
CMQ_7998
N
0.430
MDP0000699531
Malus domestica
MDP0000699531
N
0.424
TCF7L2
Tursiops truncatus
ENSTTRG00000002360
N
0.418
sr12520
Sporisorium reilianum
sr12520
N
0.418
MAJ_01270
Metarhizium majus
MAJ_01270
N
0.416
PGSC0003DMG400001413
Solanum tuberosum
PGSC0003DMG400001413
N
0.416
X797_001779
Metarhizium robertsii
X797_001779
N
0.416