XP_002490100.1 (Pichia pastoris)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 XP_002490100.1 T335360_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002490100.1 Sox 125 149
XP_002490100.1 Sox 157 205

Links

Other Sox family TFs
Other Pichia pastoris TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PAS_chr1-1_0442 Komagataella pastoris PAS_chr1-1_0442 N 0.741
GLOINDRAFT_9339 Rhizophagus irregularis GLOINDRAFT_9339 N 0.520
K437DRAFT_266676 Tilletiaria anomala K437DRAFT_266676 N 0.507
Thaps25909 Thalassiosira pseudonana Thaps25909 N 0.506
HETIRDRAFT_460226 Heterobasidion irregulare HETIRDRAFT_460226 N 0.488
estExt_Genewise1.C_120062 Heterobasidion annosum estExt_Genewise1.C_120062 N 0.488
SAKL0C03872g Lachancea kluyveri SAKL0C03872g N 0.477
SAKL0C03916g Lachancea kluyveri SAKL0C03916g N 0.477
Moror_8439 Moniliophthora roreri Moror_8439 N 0.476
Phatr3_J33840 Phaeodactylum tricornutum Phatr3_J33840 N 0.476
A1Q1_02593 Trichosporon asahii A1Q1_02593 N 0.472
MPER_12197 Moniliophthora perniciosa MPER_12197 N 0.472
SAKL0C10648g Lachancea kluyveri SAKL0C10648g N 0.472
SAKL0D09922g Lachancea kluyveri SAKL0D09922g N 0.472
RHTO_04537 Rhodosporidium toruloides RHTO_04537 N 0.471
fgenesh1_pg.C_scaffold_11000089 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000089 N 0.471
MVLG_01553 Microbotryum violaceum MVLG_01553 N 0.470
Thaps11168 Thalassiosira pseudonana Thaps11168 N 0.467
LALA0_S01e08702g Lachancea lanzarotensis LALA0_S01e08702g N 0.465
Phatr3_J47350 Phaeodactylum tricornutum Phatr3_J47350 N 0.462
Phatr3_J50240 Phaeodactylum tricornutum Phatr3_J50240 N 0.459
Thapsdraft1840 Thalassiosira pseudonana Thapsdraft1840 N 0.457
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.457
GPLIN_000170600 Globodera pallida GPLIN_000170600 N 0.451
SCHCODRAFT_110960 Schizophyllum commune SCHCODRAFT_110960 N 0.447
Thaps23446 Thalassiosira pseudonana Thaps23446 N 0.446
Phatr3_J38097 Phaeodactylum tricornutum Phatr3_J38097 N 0.444
Thaps5285 Thalassiosira pseudonana Thaps5285 N 0.440
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.439
MYCTH_2294733 Myceliophthora thermophila MYCTH_2294733 N 0.439
Phatr3_J49938 Phaeodactylum tricornutum Phatr3_J49938 N 0.439
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.439
K437DRAFT_66818 Tilletiaria anomala K437DRAFT_66818 N 0.434
Thaps24755 Thalassiosira pseudonana Thaps24755 N 0.432
Phatr3_J39045 Phaeodactylum tricornutum Phatr3_J39045 N 0.430
Thapsdraft651 Thalassiosira pseudonana Thapsdraft651 N 0.430
estExt_fgenesh2_kg.C_130080 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_130080 N 0.429
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.424
Thaps22858 Thalassiosira pseudonana Thaps22858 N 0.421
HPODL_02662 Ogataea parapolymorpha HPODL_02662 N 0.419
S40285_05706 Stachybotrys chlorohalonata S40285_05706 N 0.419
TGME49_081900 Toxoplasma gondii TGME49_081900 N 0.418
CC1G_07855 Coprinopsis cinerea CC1G_07855 N 0.417
NCLIV_023590 Neospora caninum NCLIV_023590 N 0.415