Thaps25909 (Thalassiosira pseudonana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Thaps25909 T332924_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps25909 Sox 7 32
Thaps25909 Sox 72 131

Links

Other Sox family TFs
Other Thalassiosira pseudonana TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thapsdraft1840 Thalassiosira pseudonana Thapsdraft1840 N 0.525
PAS_chr1-1_0442 Komagataella pastoris PAS_chr1-1_0442 N 0.506
XP_002490100.1 Pichia pastoris XP_002490100.1 N 0.506
Phatr3_J50240 Phaeodactylum tricornutum Phatr3_J50240 N 0.499
Thaps24755 Thalassiosira pseudonana Thaps24755 N 0.496
Phatr3_J38097 Phaeodactylum tricornutum Phatr3_J38097 N 0.486
Phatr3_J47350 Phaeodactylum tricornutum Phatr3_J47350 N 0.481
Phatr3_J33840 Phaeodactylum tricornutum Phatr3_J33840 N 0.480
Thaps22858 Thalassiosira pseudonana Thaps22858 N 0.480
Thaps23446 Thalassiosira pseudonana Thaps23446 N 0.478
Thaps11168 Thalassiosira pseudonana Thaps11168 N 0.474
HETIRDRAFT_460226 Heterobasidion irregulare HETIRDRAFT_460226 N 0.473
estExt_Genewise1.C_120062 Heterobasidion annosum estExt_Genewise1.C_120062 N 0.473
Phatr3_J39045 Phaeodactylum tricornutum Phatr3_J39045 N 0.466
S40285_05706 Stachybotrys chlorohalonata S40285_05706 N 0.466
GLOINDRAFT_9339 Rhizophagus irregularis GLOINDRAFT_9339 N 0.464
fgenesh2_pg.4_#_1036 Fragilariopsis cylindrus fgenesh2_pg.4_#_1036 N 0.458
SAKL0C10648g Lachancea kluyveri SAKL0C10648g N 0.458
estExt_fgenesh2_kg.C_130080 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_130080 N 0.455
Thaps5285 Thalassiosira pseudonana Thaps5285 N 0.453
Thapsdraft651 Thalassiosira pseudonana Thapsdraft651 N 0.448
fgenesh2_pg.9_#_353 Fragilariopsis cylindrus fgenesh2_pg.9_#_353 N 0.446
fgenesh1_pg.C_scaffold_11000089 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000089 N 0.444
SAKL0C03872g Lachancea kluyveri SAKL0C03872g N 0.442
SAKL0C03916g Lachancea kluyveri SAKL0C03916g N 0.442
MVLG_01553 Microbotryum violaceum MVLG_01553 N 0.436
Thaps12024 Thalassiosira pseudonana Thaps12024 N 0.436
K437DRAFT_266676 Tilletiaria anomala K437DRAFT_266676 N 0.434
MAM_05902 Metarhizium album MAM_05902 N 0.428
A1Q1_02593 Trichosporon asahii A1Q1_02593 N 0.427
RHTO_04537 Rhodosporidium toruloides RHTO_04537 N 0.427
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.426
Moror_8439 Moniliophthora roreri Moror_8439 N 0.424
SAKL0D09922g Lachancea kluyveri SAKL0D09922g N 0.424
TGME49_081900 Toxoplasma gondii TGME49_081900 N 0.422
AWRI1499_2837 Brettanomyces bruxellensis AWRI1499_2837 N 0.421
MPER_12197 Moniliophthora perniciosa MPER_12197 N 0.418
Phatr3_J49938 Phaeodactylum tricornutum Phatr3_J49938 N 0.417