Thaps23446 (Thalassiosira pseudonana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Thaps23446 T332919_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps23446 Sox 10 41
Thaps23446 Sox 70 129

Links

Other Sox family TFs
Other Thalassiosira pseudonana TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thaps25909 Thalassiosira pseudonana Thaps25909 N 0.478
Thaps24500 Thalassiosira pseudonana Thaps24500 N 0.474
Thapsdraft1840 Thalassiosira pseudonana Thapsdraft1840 N 0.459
PAS_chr1-1_0442 Komagataella pastoris PAS_chr1-1_0442 N 0.446
XP_002490100.1 Pichia pastoris XP_002490100.1 N 0.446
Thaps22858 Thalassiosira pseudonana Thaps22858 N 0.445
Thaps24755 Thalassiosira pseudonana Thaps24755 N 0.440
Phatr3_J49938 Phaeodactylum tricornutum Phatr3_J49938 N 0.436
Phatr3_J38097 Phaeodactylum tricornutum Phatr3_J38097 N 0.433
Thaps22889 Thalassiosira pseudonana Thaps22889 N 0.431
estExt_Genewise1Plus.C_70298 Fragilariopsis cylindrus estExt_Genewise1Plus.C_70298 N 0.430
Thaps5285 Thalassiosira pseudonana Thaps5285 N 0.427
estExt_fgenesh2_kg.C_130080 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_130080 N 0.427
Phatr3_J50240 Phaeodactylum tricornutum Phatr3_J50240 N 0.422
Phatr3_J39045 Phaeodactylum tricornutum Phatr3_J39045 N 0.421
Phatr3_J47350 Phaeodactylum tricornutum Phatr3_J47350 N 0.415