CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_9339
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_9339
T330218_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERZ99601
Sox
52
66
IKRPPNSYIIFSVLL
ERZ99601
Sox
83
131
KINKQKLVPISKIISKNLWNELSIEHKNIYSNLAVEVEKEHKKLYPDYN
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MPER_12197
Moniliophthora perniciosa
MPER_12197
N
0.582
RHTO_04537
Rhodosporidium toruloides
RHTO_04537
N
0.581
MVLG_01553
Microbotryum violaceum
MVLG_01553
N
0.576
Moror_8439
Moniliophthora roreri
Moror_8439
N
0.569
fgenesh1_pg.C_scaffold_11000089
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_11000089
N
0.568
HETIRDRAFT_460226
Heterobasidion irregulare
HETIRDRAFT_460226
N
0.538
estExt_Genewise1.C_120062
Heterobasidion annosum
estExt_Genewise1.C_120062
N
0.538
SAKL0C03872g
Lachancea kluyveri
SAKL0C03872g
N
0.538
SAKL0C03916g
Lachancea kluyveri
SAKL0C03916g
N
0.538
SAKL0C10648g
Lachancea kluyveri
SAKL0C10648g
N
0.538
JAAARDRAFT_460099
Jaapia argillacea
JAAARDRAFT_460099
N
0.534
SAKL0D09922g
Lachancea kluyveri
SAKL0D09922g
N
0.525
PAS_chr1-1_0442
Komagataella pastoris
PAS_chr1-1_0442
N
0.520
XP_002490100.1
Pichia pastoris
XP_002490100.1
N
0.520
M407DRAFT_45069
Tulasnella calospora
M407DRAFT_45069
N
0.514
A1Q1_02593
Trichosporon asahii
A1Q1_02593
N
0.511
K437DRAFT_266676
Tilletiaria anomala
K437DRAFT_266676
N
0.509
PAS_chr3_1149
Komagataella pastoris
PAS_chr3_1149
N
0.501
XP_002492281.1
Pichia pastoris
XP_002492281.1
N
0.501
BGIBMGA006156
Bombyx mori
BGIBMGA006156
N
0.497
K437DRAFT_66818
Tilletiaria anomala
K437DRAFT_66818
N
0.492
HPODL_02662
Ogataea parapolymorpha
HPODL_02662
N
0.486
UCREL1_5722
Eutypa lata
UCREL1_5722
N
0.482
AWRI1499_2837
Brettanomyces bruxellensis
AWRI1499_2837
N
0.475
KUCA_T00004799001
Kuraishia capsulata
KUCA_T00004799001
N
0.475
sr12520
Sporisorium reilianum
sr12520
N
0.467
LALA0_S01e08702g
Lachancea lanzarotensis
LALA0_S01e08702g
N
0.464
Thaps25909
Thalassiosira pseudonana
Thaps25909
N
0.464
EVEC_0001251901
Enterobius vermicularis
EVEC_0001251901
N
0.461
TSTA_110260
Talaromyces stipitatus
TSTA_110260
N
0.459
LALA0_S10e00254g
Lachancea lanzarotensis
LALA0_S10e00254g
N
0.456
CC1G_07855
Coprinopsis cinerea
CC1G_07855
N
0.446
SAKL0H00726g
Lachancea kluyveri
SAKL0H00726g
N
0.445
GPLIN_000170600
Globodera pallida
GPLIN_000170600
N
0.442
Kwal_9519
Kluyveromyces waltii
Kwal_9519
N
0.441
Thaps11168
Thalassiosira pseudonana
Thaps11168
N
0.433
S40285_05706
Stachybotrys chlorohalonata
S40285_05706
N
0.432
KLLA0_B11495g
Kluyveromyces lactis
KLLA0_B11495g
N
0.428
Thaps5285
Thalassiosira pseudonana
Thaps5285
N
0.427
MCOS_0000664501
Mesocestoides corti
MCOS_0000664501
N
0.426
BN7_5943
Wickerhamomyces ciferrii
BN7_5943
N
0.423
Phatr3_J33840
Phaeodactylum tricornutum
Phatr3_J33840
N
0.423
CMQ_7998
Grosmannia clavigera
CMQ_7998
N
0.417
Phatr3_J50240
Phaeodactylum tricornutum
Phatr3_J50240
N
0.415