Thapsdraft651 (Thalassiosira pseudonana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Thapsdraft651 T332948_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thapsdraft651 Sox 83 108
Thapsdraft651 Sox 112 171

Links

Other Sox family TFs
Other Thalassiosira pseudonana TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thaps10099 Thalassiosira pseudonana Thaps10099 N 0.657
Thaps24954 Thalassiosira pseudonana Thaps24954 N 0.655
Thaps4075 Thalassiosira pseudonana Thaps4075 N 0.637
Thaps4076 Thalassiosira pseudonana Thaps4076 N 0.637
Thaps22372 Thalassiosira pseudonana Thaps22372 N 0.564
Phatr3_J38097 Phaeodactylum tricornutum Phatr3_J38097 N 0.519
Phatr3_J47350 Phaeodactylum tricornutum Phatr3_J47350 N 0.514
fgenesh2_pg.9_#_353 Fragilariopsis cylindrus fgenesh2_pg.9_#_353 N 0.493
Phatr3_J49938 Phaeodactylum tricornutum Phatr3_J49938 N 0.481
S40285_05706 Stachybotrys chlorohalonata S40285_05706 N 0.468
Thaps11168 Thalassiosira pseudonana Thaps11168 N 0.463
Phatr3_J39045 Phaeodactylum tricornutum Phatr3_J39045 N 0.460
MAM_05902 Metarhizium album MAM_05902 N 0.455
Thaps5285 Thalassiosira pseudonana Thaps5285 N 0.451
Phatr3_J50240 Phaeodactylum tricornutum Phatr3_J50240 N 0.449
Phatr3_J42576 Phaeodactylum tricornutum Phatr3_J42576 N 0.448
Thaps25909 Thalassiosira pseudonana Thaps25909 N 0.448
Phatr3_J49506 Phaeodactylum tricornutum Phatr3_J49506 N 0.445
estExt_Genewise1Plus.C_70298 Fragilariopsis cylindrus estExt_Genewise1Plus.C_70298 N 0.442
Thaps22889 Thalassiosira pseudonana Thaps22889 N 0.436
PAS_chr1-1_0442 Komagataella pastoris PAS_chr1-1_0442 N 0.430
Phatr3_J33840 Phaeodactylum tricornutum Phatr3_J33840 N 0.430
estExt_fgenesh2_kg.C_130080 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_130080 N 0.430
XP_002490100.1 Pichia pastoris XP_002490100.1 N 0.430
fgenesh2_pg.7_#_214 Fragilariopsis cylindrus fgenesh2_pg.7_#_214 N 0.428