Thaps4075 (Thalassiosira pseudonana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Thaps4075 T332935_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps4075 Sox 56 81
Thaps4075 Sox 84 144

Links

Other Sox family TFs
Other Thalassiosira pseudonana TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thaps4076 Thalassiosira pseudonana Thaps4076 N 0.741
Thaps24954 Thalassiosira pseudonana Thaps24954 N 0.641
Thaps10099 Thalassiosira pseudonana Thaps10099 N 0.639
Thapsdraft651 Thalassiosira pseudonana Thapsdraft651 N 0.637
Thaps22372 Thalassiosira pseudonana Thaps22372 N 0.576
fgenesh2_pg.9_#_353 Fragilariopsis cylindrus fgenesh2_pg.9_#_353 N 0.521
Phatr3_J47350 Phaeodactylum tricornutum Phatr3_J47350 N 0.517
Phatr3_J38097 Phaeodactylum tricornutum Phatr3_J38097 N 0.498
Phatr3_J42576 Phaeodactylum tricornutum Phatr3_J42576 N 0.496
Phatr3_J39045 Phaeodactylum tricornutum Phatr3_J39045 N 0.480
Thaps5285 Thalassiosira pseudonana Thaps5285 N 0.479
Phatr3_J49938 Phaeodactylum tricornutum Phatr3_J49938 N 0.476
estExt_Genewise1Plus.C_70298 Fragilariopsis cylindrus estExt_Genewise1Plus.C_70298 N 0.472
MAM_05902 Metarhizium album MAM_05902 N 0.469
S40285_05706 Stachybotrys chlorohalonata S40285_05706 N 0.468
Phatr3_J50240 Phaeodactylum tricornutum Phatr3_J50240 N 0.458
Thaps11168 Thalassiosira pseudonana Thaps11168 N 0.458
Thaps22889 Thalassiosira pseudonana Thaps22889 N 0.452
Thaps12024 Thalassiosira pseudonana Thaps12024 N 0.436
Phatr3_J48554 Phaeodactylum tricornutum Phatr3_J48554 N 0.425
Phatr3_J33840 Phaeodactylum tricornutum Phatr3_J33840 N 0.422
estExt_fgenesh2_kg.C_130080 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_130080 N 0.422
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.419
Phatr3_J49506 Phaeodactylum tricornutum Phatr3_J49506 N 0.418