fgenesh1_pg.C_scaffold_10000369 (Phanerochaete chrysosporium)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh1_pg.C_scaffold_10000369 T334096_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_10000369 Sox 80 123
fgenesh1_pg.C_scaffold_10000369 Sox 144 172

Links

Other Sox family TFs
Other Phanerochaete chrysosporium TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIS002444 Anopheles sinensis ASIS002444 N 0.492
CLEC004367 Cimex lectularius CLEC004367 N 0.491
HelroG178674 Helobdella robusta HelroG178674 N 0.486
BGIOSGA031227 Oryza indica BGIOSGA031227 N 0.470
OBART09G18880 Oryza barthii OBART09G18880 N 0.470
OGLUM09G19410 Oryza glumaepatula OGLUM09G19410 N 0.470
OPUNC09G17310 Oryza punctata OPUNC09G17310 N 0.470
D917_04157 Trichinella nativa D917_04157 N 0.460
SINV25043 Solenopsis invicta SINV25043 N 0.459
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.458
GH16346 Drosophila grimshawi FBgn0123817 N 0.455
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.455
LCUP017801 Lucilia cuprina LCUP017801 N 0.455
Ca_10726 Cicer arietinum Ca_10726 N 0.454
Lus10027787.g Linum usitatissimum Lus10027787.g N 0.454
Lus10016695.g Linum usitatissimum Lus10016695.g N 0.452
Lus10035991.g Linum usitatissimum Lus10035991.g N 0.452
Bra012832 Brassica rapa Bra012832 N 0.450
Cla010647 Citrullus lanatus Cla010647 N 0.442
Pm010381 Prunus mume Pm010381 N 0.440
MDP0000699531 Malus domestica MDP0000699531 N 0.440
OLONG_009629 Oryza longistaminata OLONG_009629 N 0.439
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.437
Lus10013219.g Linum usitatissimum Lus10013219.g N 0.437
ASIM_0001132301 Anisakis simplex ASIM_0001132301 N 0.433
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.426
BGIBMGA006156 Bombyx mori BGIBMGA006156 N 0.424
SCHCODRAFT_105718 Schizophyllum commune SCHCODRAFT_105718 N 0.421
EEL_0000370701 Elaeophora elaphi EEL_0000370701 N 0.419
PEQ_0000006801 Parascaris equorum PEQ_0000006801 N 0.416