D917_04157 (Trichinella nativa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 D917_04157 T336165_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
D917_04157 Sox 236 284
D917_04157 Sox 327 358

Links

Other Sox family TFs
Other Trichinella nativa TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TriadG58720 Trichoplax adhaerens TriadG58720 N 0.486
EEL_0000370701 Elaeophora elaphi EEL_0000370701 N 0.475
PEQ_0000006801 Parascaris equorum PEQ_0000006801 N 0.474
Bra012832 Brassica rapa Bra012832 N 0.462
Ca_10726 Cicer arietinum Ca_10726 N 0.462
BGIOSGA031227 Oryza indica BGIOSGA031227 N 0.461
OPUNC09G17310 Oryza punctata OPUNC09G17310 N 0.461
OBART09G18880 Oryza barthii OBART09G18880 N 0.461
OGLUM09G19410 Oryza glumaepatula OGLUM09G19410 N 0.461
fgenesh1_pg.C_scaffold_10000369 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_10000369 N 0.460
CRE07740 Caenorhabditis remanei CRE07740 N 0.458
Lus10016695.g Linum usitatissimum Lus10016695.g N 0.454
Lus10035991.g Linum usitatissimum Lus10035991.g N 0.454
OLONG_009629 Oryza longistaminata OLONG_009629 N 0.448
Lus10013219.g Linum usitatissimum Lus10013219.g N 0.448
MDP0000699531 Malus domestica MDP0000699531 N 0.445
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.441
HelroG178674 Helobdella robusta HelroG178674 N 0.436
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.431
Cla010647 Citrullus lanatus Cla010647 N 0.429
Lus10027787.g Linum usitatissimum Lus10027787.g N 0.427