BGIOSGA031227 (Oryza indica)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 BGIOSGA031227 T326598_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA031227-PA Sox 28 74
BGIOSGA031227-PA Sox 80 109

Links

Other Sox family TFs
Other Oryza indica TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART09G18880 Oryza barthii OBART09G18880 N 0.741
OGLUM09G19410 Oryza glumaepatula OGLUM09G19410 N 0.741
OPUNC09G17310 Oryza punctata OPUNC09G17310 N 0.738
OLONG_009629 Oryza longistaminata OLONG_009629 N 0.628
Lus10035991.g Linum usitatissimum Lus10035991.g N 0.608
Bra012832 Brassica rapa Bra012832 N 0.605
Lus10013219.g Linum usitatissimum Lus10013219.g N 0.604
Lus10016695.g Linum usitatissimum Lus10016695.g N 0.594
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.582
Ca_10726 Cicer arietinum Ca_10726 N 0.561
Lus10027787.g Linum usitatissimum Lus10027787.g N 0.556
Cla010647 Citrullus lanatus Cla010647 N 0.526
MDP0000699531 Malus domestica MDP0000699531 N 0.501
PEQ_0000006801 Parascaris equorum PEQ_0000006801 N 0.501
EEL_0000370701 Elaeophora elaphi EEL_0000370701 N 0.484
fgenesh1_pg.C_scaffold_10000369 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_10000369 N 0.470
TCM_042534 Theobroma cacao TCM_042534 I 0.467
D917_04157 Trichinella nativa D917_04157 N 0.461
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N 0.449
TriadG58720 Trichoplax adhaerens TriadG58720 N 0.445
Pm010381 Prunus mume Pm010381 N 0.443
CLEC004367 Cimex lectularius CLEC004367 N 0.434
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.429
ASIS002444 Anopheles sinensis ASIS002444 N 0.423
SCHCODRAFT_105718 Schizophyllum commune SCHCODRAFT_105718 N 0.421
HelroG178674 Helobdella robusta HelroG178674 N 0.417