Pm010381 (Prunus mume)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Pm010381 T333835_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm010381 Sox 135 165
Pm010381 Sox 161 189

Links

Other Sox family TFs
Other Prunus mume TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra012832 Brassica rapa Bra012832 N 0.556
Lus10027787.g Linum usitatissimum Lus10027787.g N 0.546
MDP0000699531 Malus domestica MDP0000699531 N 0.544
Lus10013219.g Linum usitatissimum Lus10013219.g N 0.543
Lus10016695.g Linum usitatissimum Lus10016695.g N 0.542
Lus10035991.g Linum usitatissimum Lus10035991.g N 0.542
Cla010647 Citrullus lanatus Cla010647 N 0.534
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N 0.526
Ca_10726 Cicer arietinum Ca_10726 N 0.496
HelroG178674 Helobdella robusta HelroG178674 N 0.488
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.480
OLONG_009629 Oryza longistaminata OLONG_009629 N 0.474
Bo6g005800 Brassica oleracea Bo6g005800 N 0.472
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.461
TCF7L2 Tursiops truncatus ENSTTRG00000002360 N 0.460
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.457
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.449
BGIOSGA031227 Oryza indica BGIOSGA031227 N 0.443
OBART09G18880 Oryza barthii OBART09G18880 N 0.443
OGLUM09G19410 Oryza glumaepatula OGLUM09G19410 N 0.443
OPUNC09G17310 Oryza punctata OPUNC09G17310 N 0.443
fgenesh1_pg.C_scaffold_10000369 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_10000369 N 0.440
BGIBMGA006156 Bombyx mori BGIBMGA006156 N 0.439
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.434