CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh2_pg.C_20645
(
Heterobasidion annosum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
estExt_fgenesh2_pg.C_20645
T335206_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_20645
Sox
104
179
VPRPRNAFIIFRCEYASKHAKHGSSSGATSATATDTTLSKRAGEAWKRLSDEEHEHYKALADAEKLDHALRNPDYR
Links
Other
Sox
family TFs
Other
Heterobasidion annosum
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_46840
Agaricus bisporus
AGABI2DRAFT_46840
I
0.449
BN7_1833
Wickerhamomyces ciferrii
BN7_1833
I
0.427
BN946_scf184829.g43
Trametes cinnabarina
BN946_scf184829.g43
I
0.441
CANTEDRAFT_136140
Candida tenuis
CANTEDRAFT_136140
I
0.420
CaO19.10341
Candida albicans
CaO19.10341
I
0.427
CC1G_03536
Coprinopsis cinerea
CC1G_03536
N
0.436
CC1G_06994
Coprinopsis cinerea
CC1G_06994
I
0.432
CC1G_13994
Coprinopsis cinerea
CC1G_13994
N
0.420
CD36_27640
Candida dubliniensis
CD36_27640
I
0.427
CERSUDRAFT_61596
Ceriporiopsis subvermispora
CERSUDRAFT_61596
N
0.420
CERSUDRAFT_97591
Ceriporiopsis subvermispora
CERSUDRAFT_97591
N
0.478
CMQ_1586
Grosmannia clavigera
CMQ_1586
I
0.423
CTRG_00834
Candida tropicalis
CTRG_00834
I
0.427
CY34DRAFT_31998
Suillus luteus
CY34DRAFT_31998
I
0.479
CY34DRAFT_812082
Suillus luteus
CY34DRAFT_812082
I
0.431
DICSQDRAFT_40774
Dichomitus squalens
DICSQDRAFT_40774
I
0.434
estExt_fgenesh1_pg.C_chr_3.10092
Pichia stipitis
estExt_fgenesh1_pg.C_chr_3.10092
I
0.427
fgenesh1_pg.C_scaffold_1000909
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_1000909
N
0.502
fgenesh1_pg.C_scaffold_14000043
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_14000043
I
0.429
fgenesh1_pg.C_scaffold_7000434
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_7000434
I
0.457
fgenesh1_pg.scaffold_41000062
Monosiga brevicollis
fgenesh1_pg.scaffold_41000062
I
0.426
FIBRA_06688
Fibroporia radiculosa
FIBRA_06688
I
0.479
FOMPIDRAFT_111082
Fomitopsis pinicola
FOMPIDRAFT_111082
N
0.523
G210_0578
Candida maltosa
G210_0578
I
0.427
GALMADRAFT_1187634
Galerina marginata
GALMADRAFT_1187634
N
0.446
GALMADRAFT_137502
Galerina marginata
GALMADRAFT_137502
N
0.457
GALMADRAFT_243779
Galerina marginata
GALMADRAFT_243779
N
0.457
GALMADRAFT_252018
Galerina marginata
GALMADRAFT_252018
N
0.457
GALMADRAFT_340474
Galerina marginata
GALMADRAFT_340474
I
0.447
GLOTRDRAFT_127199
Gloeophyllum trabeum
GLOTRDRAFT_127199
N
0.560
GYMLUDRAFT_85036
Gymnopus luxurians
GYMLUDRAFT_85036
I
0.422
HETIRDRAFT_150286
Heterobasidion irregulare
HETIRDRAFT_150286
N
0.741
HYDPIDRAFT_113320
Hydnomerulius pinastri
HYDPIDRAFT_113320
I
0.512
JAAARDRAFT_33297
Jaapia argillacea
JAAARDRAFT_33297
I
0.448
JAAARDRAFT_62109
Jaapia argillacea
JAAARDRAFT_62109
I
0.427
K443DRAFT_250430
Laccaria amethystina
K443DRAFT_250430
I
0.442
K443DRAFT_4774
Laccaria amethystina
K443DRAFT_4774
I
0.462
L798_09327
Zootermopsis nevadensis
L798_09327
I
0.429
L798_14304
Zootermopsis nevadensis
L798_14304
I
0.420
LACBIDRAFT_300898
Laccaria bicolor
LACBIDRAFT_300898
I
0.462
M378DRAFT_124313
Amanita muscaria
M378DRAFT_124313
I
0.509
M378DRAFT_42891
Amanita muscaria
M378DRAFT_42891
I
0.455
M404DRAFT_159338
Pisolithus tinctorius
M404DRAFT_159338
I
0.476
M413DRAFT_21819
Hebeloma cylindrosporum
M413DRAFT_21819
N
0.421
M422DRAFT_89155
Sphaerobolus stellatus
M422DRAFT_89155
I
0.427
Moror_4724
Moniliophthora roreri
Moror_4724
I
0.424
PAXINDRAFT_17515
Paxillus involutus
PAXINDRAFT_17515
I
0.514
PAXRUDRAFT_47613
Paxillus rubicundulus
PAXRUDRAFT_47613
I
0.507
PHACADRAFT_184752
Phanerochaete carnosa
PHACADRAFT_184752
N
0.516
PICST_67218
Scheffersomyces stipitis
PICST_67218
I
0.427
PILCRDRAFT_274623
Piloderma croceum
PILCRDRAFT_274623
N
0.465
PISMIDRAFT_36586
Pisolithus microcarpus
PISMIDRAFT_36586
I
0.476
PLEOSDRAFT_1016849
Pleurotus ostreatus
PLEOSDRAFT_1016849
N
0.415
POSPLDRAFT_92418
Postia placenta
POSPLDRAFT_92418
I
0.530
SAKL0F03872g
Lachancea kluyveri
SAKL0F03872g
I
0.422
SCHCODRAFT_230584
Schizophyllum commune
SCHCODRAFT_230584
I
0.432
SCHCODRAFT_232950
Schizophyllum commune
SCHCODRAFT_232950
I
0.424
SCLCIDRAFT_81131
Scleroderma citrinum
SCLCIDRAFT_81131
I
0.476
SERLA73DRAFT_141654
Serpula lacrymans
SERLA73DRAFT_141654
I
0.475
SMAR001063
Strigamia maritima
SMAR001063
I
0.420
SPAPADRAFT_59824
Spathaspora passalidarum
SPAPADRAFT_59824
I
0.427
TDEL_0C04960
Torulaspora delbrueckii
TDEL_0C04960
I
0.427
XP_002160058.1
Hydra magnipapillata
XP_002160058.1
I
0.423