fgenesh1_pg.C_scaffold_10000074 (Cryphonectria parasitica)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh1_pg.C_scaffold_10000074 T335225_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRC
M07266_2.00 		Arabidopsis thaliana
TWATCATW
WATGATWA		 Dap-seq
OMalley et al.(2016)
CRC_col_a 		0.425 0.261
CRC
M07267_2.00 		Arabidopsis thaliana
GGTTAGTGTTTTGGAGTCGAATATGACTTG
CAAGTCATATTCGACTCCAAAACACTAACC		 Dap-seq
OMalley et al.(2016)
CRC_colamp_a 		0.425 0.261
YAB1
M00890_2.00 		Arabidopsis thaliana
AATAATWA
TWATTATT		 PBM
Franco-Zorrilla et al.(2014)
YAB1 		0.419 0.261
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_10000074 Sox 541 586

Links

Other Sox family TFs
Other Cryphonectria parasitica TFs

270 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_004330 Trichomonas vaginalis TVAG_004330 N
TVAG_006520 Trichomonas vaginalis TVAG_006520 N
TVAG_007060 Trichomonas vaginalis TVAG_007060 N
TVAG_015360 Trichomonas vaginalis TVAG_015360 N
TVAG_018730 Trichomonas vaginalis TVAG_018730 N
TVAG_022640 Trichomonas vaginalis TVAG_022640 N
TVAG_022870 Trichomonas vaginalis TVAG_022870 N
TVAG_023890 Trichomonas vaginalis TVAG_023890 N
TVAG_025350 Trichomonas vaginalis TVAG_025350 N
TVAG_030270 Trichomonas vaginalis TVAG_030270 N
TVAG_030650 Trichomonas vaginalis TVAG_030650 N
TVAG_045200 Trichomonas vaginalis TVAG_045200 N
TVAG_051380 Trichomonas vaginalis TVAG_051380 N
TVAG_055730 Trichomonas vaginalis TVAG_055730 N
TVAG_057510 Trichomonas vaginalis TVAG_057510 N
TVAG_058980 Trichomonas vaginalis TVAG_058980 N
TVAG_065250 Trichomonas vaginalis TVAG_065250 N
TVAG_065540 Trichomonas vaginalis TVAG_065540 N
TVAG_069420 Trichomonas vaginalis TVAG_069420 N
TVAG_075700 Trichomonas vaginalis TVAG_075700 N
TVAG_077710 Trichomonas vaginalis TVAG_077710 N
TVAG_078220 Trichomonas vaginalis TVAG_078220 N
TVAG_081270 Trichomonas vaginalis TVAG_081270 N
TVAG_084310 Trichomonas vaginalis TVAG_084310 N
TVAG_085010 Trichomonas vaginalis TVAG_085010 N
TVAG_086760 Trichomonas vaginalis TVAG_086760 N
TVAG_092250 Trichomonas vaginalis TVAG_092250 N
TVAG_095370 Trichomonas vaginalis TVAG_095370 N
TVAG_096560 Trichomonas vaginalis TVAG_096560 N
TVAG_109190 Trichomonas vaginalis TVAG_109190 N
TVAG_117610 Trichomonas vaginalis TVAG_117610 N
TVAG_117870 Trichomonas vaginalis TVAG_117870 N
TVAG_128100 Trichomonas vaginalis TVAG_128100 N
TVAG_129250 Trichomonas vaginalis TVAG_129250 N
TVAG_131780 Trichomonas vaginalis TVAG_131780 N
TVAG_133720 Trichomonas vaginalis TVAG_133720 N
TVAG_138460 Trichomonas vaginalis TVAG_138460 N
TVAG_141080 Trichomonas vaginalis TVAG_141080 N
TVAG_141640 Trichomonas vaginalis TVAG_141640 N
TVAG_152080 Trichomonas vaginalis TVAG_152080 N
TVAG_152850 Trichomonas vaginalis TVAG_152850 N
TVAG_155260 Trichomonas vaginalis TVAG_155260 N
TVAG_155470 Trichomonas vaginalis TVAG_155470 N
TVAG_172760 Trichomonas vaginalis TVAG_172760 N
TVAG_173010 Trichomonas vaginalis TVAG_173010 N
TVAG_181790 Trichomonas vaginalis TVAG_181790 N
TVAG_181810 Trichomonas vaginalis TVAG_181810 N
TVAG_189450 Trichomonas vaginalis TVAG_189450 N
TVAG_194050 Trichomonas vaginalis TVAG_194050 N
TVAG_199660 Trichomonas vaginalis TVAG_199660 N
TVAG_202410 Trichomonas vaginalis TVAG_202410 N
TVAG_208390 Trichomonas vaginalis TVAG_208390 N
TVAG_209630 Trichomonas vaginalis TVAG_209630 N
TVAG_210220 Trichomonas vaginalis TVAG_210220 N
TVAG_218370 Trichomonas vaginalis TVAG_218370 N
TVAG_230320 Trichomonas vaginalis TVAG_230320 N
TVAG_231870 Trichomonas vaginalis TVAG_231870 N
TVAG_233530 Trichomonas vaginalis TVAG_233530 N
TVAG_236380 Trichomonas vaginalis TVAG_236380 N
TVAG_241060 Trichomonas vaginalis TVAG_241060 N
TVAG_255040 Trichomonas vaginalis TVAG_255040 N
TVAG_264410 Trichomonas vaginalis TVAG_264410 N
TVAG_269480 Trichomonas vaginalis TVAG_269480 N
TVAG_269580 Trichomonas vaginalis TVAG_269580 N
TVAG_272550 Trichomonas vaginalis TVAG_272550 N
TVAG_278760 Trichomonas vaginalis TVAG_278760 N
TVAG_279620 Trichomonas vaginalis TVAG_279620 N
TVAG_285040 Trichomonas vaginalis TVAG_285040 N
TVAG_304110 Trichomonas vaginalis TVAG_304110 I
TVAG_307820 Trichomonas vaginalis TVAG_307820 N
TVAG_317130 Trichomonas vaginalis TVAG_317130 N
TVAG_331810 Trichomonas vaginalis TVAG_331810 N
TVAG_332350 Trichomonas vaginalis TVAG_332350 N
TVAG_346350 Trichomonas vaginalis TVAG_346350 N
TVAG_348790 Trichomonas vaginalis TVAG_348790 N
TVAG_349450 Trichomonas vaginalis TVAG_349450 N
TVAG_353210 Trichomonas vaginalis TVAG_353210 N
TVAG_355410 Trichomonas vaginalis TVAG_355410 N
TVAG_355880 Trichomonas vaginalis TVAG_355880 N
TVAG_355890 Trichomonas vaginalis TVAG_355890 N
TVAG_356990 Trichomonas vaginalis TVAG_356990 N
TVAG_357700 Trichomonas vaginalis TVAG_357700 N
TVAG_361810 Trichomonas vaginalis TVAG_361810 N
TVAG_364890 Trichomonas vaginalis TVAG_364890 N
TVAG_366530 Trichomonas vaginalis TVAG_366530 N
TVAG_366770 Trichomonas vaginalis TVAG_366770 N
TVAG_367290 Trichomonas vaginalis TVAG_367290 N
TVAG_368880 Trichomonas vaginalis TVAG_368880 N
TVAG_370220 Trichomonas vaginalis TVAG_370220 N
TVAG_376580 Trichomonas vaginalis TVAG_376580 N
TVAG_377000 Trichomonas vaginalis TVAG_377000 N
TVAG_377090 Trichomonas vaginalis TVAG_377090 N
TVAG_381530 Trichomonas vaginalis TVAG_381530 N
TVAG_382960 Trichomonas vaginalis TVAG_382960 N
TVAG_385530 Trichomonas vaginalis TVAG_385530 N
TVAG_400660 Trichomonas vaginalis TVAG_400660 N
TVAG_401510 Trichomonas vaginalis TVAG_401510 N
TVAG_405610 Trichomonas vaginalis TVAG_405610 N
TVAG_418100 Trichomonas vaginalis TVAG_418100 N
TVAG_424630 Trichomonas vaginalis TVAG_424630 N
TVAG_425150 Trichomonas vaginalis TVAG_425150 N
TVAG_433330 Trichomonas vaginalis TVAG_433330 N
TVAG_437540 Trichomonas vaginalis TVAG_437540 N
TVAG_438970 Trichomonas vaginalis TVAG_438970 N
TVAG_439000 Trichomonas vaginalis TVAG_439000 N
TVAG_439290 Trichomonas vaginalis TVAG_439290 N
TVAG_440300 Trichomonas vaginalis TVAG_440300 N
TVAG_449370 Trichomonas vaginalis TVAG_449370 N
TVAG_450870 Trichomonas vaginalis TVAG_450870 N
TVAG_454650 Trichomonas vaginalis TVAG_454650 N
TVAG_458610 Trichomonas vaginalis TVAG_458610 N
TVAG_469490 Trichomonas vaginalis TVAG_469490 N
TVAG_472310 Trichomonas vaginalis TVAG_472310 N
TVAG_474270 Trichomonas vaginalis TVAG_474270 I
TVAG_484220 Trichomonas vaginalis TVAG_484220 N
TVAG_484250 Trichomonas vaginalis TVAG_484250 N
TVAG_488780 Trichomonas vaginalis TVAG_488780 N
TVAG_499220 Trichomonas vaginalis TVAG_499220 N
TVAG_500620 Trichomonas vaginalis TVAG_500620 N
TVAG_511200 Trichomonas vaginalis TVAG_511200 N
TVAG_513300 Trichomonas vaginalis TVAG_513300 N
TVAG_514390 Trichomonas vaginalis TVAG_514390 N
TVAG_517040 Trichomonas vaginalis TVAG_517040 N
TVAG_520380 Trichomonas vaginalis TVAG_520380 N
TVAG_521260 Trichomonas vaginalis TVAG_521260 N
TVAG_521560 Trichomonas vaginalis TVAG_521560 N
TVAG_527500 Trichomonas vaginalis TVAG_527500 N
TVAG_534250 Trichomonas vaginalis TVAG_534250 N
TVAG_538000 Trichomonas vaginalis TVAG_538000 N
TVAG_540060 Trichomonas vaginalis TVAG_540060 N
TVAG_552960 Trichomonas vaginalis TVAG_552960 N
TVAG_559230 Trichomonas vaginalis TVAG_559230 N
TVAG_559790 Trichomonas vaginalis TVAG_559790 N
TVAG_565490 Trichomonas vaginalis TVAG_565490 N
TVAG_571460 Trichomonas vaginalis TVAG_571460 N
TVAG_571520 Trichomonas vaginalis TVAG_571520 N
TVAG_575020 Trichomonas vaginalis TVAG_575020 N
TVAG_579320 Trichomonas vaginalis TVAG_579320 N
TVAG_579820 Trichomonas vaginalis TVAG_579820 N
TVAG_581530 Trichomonas vaginalis TVAG_581530 N
TVAG_584420 Trichomonas vaginalis TVAG_584420 N
TVAG_586700 Trichomonas vaginalis TVAG_586700 N
TVAG_593090 Trichomonas vaginalis TVAG_593090 N
TVAG_595620 Trichomonas vaginalis TVAG_595620 N
TVAG_596600 Trichomonas vaginalis TVAG_596600 N
TVAG_597840 Trichomonas vaginalis TVAG_597840 N