GPLIN_000239300 (Globodera pallida)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 GPLIN_000239300 T336332_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000239300 Sox 22 90

Links

Other Sox family TFs
Other Globodera pallida TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N 0.541
ACEP21543 Atta cephalotes ACEP21543 N 0.418
ALUE_0000987201 Ascaris lumbricoides ALUE_0000987201 N 0.594
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.548
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.548
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.548
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.548
ASIM_0000973401 Anisakis simplex ASIM_0000973401 N 0.447
ASIM_0001578601 Anisakis simplex ASIM_0001578601 N 0.600
ASIM_0001639001 Anisakis simplex ASIM_0001639001 N 0.600
ASU_02248 Ascaris suum ASU_02248 N 0.594
Bm12451 Brugia malayi Bm12451 N 0.441
Bm7076 Brugia malayi Bm7076 N 0.587
CBG09815 Caenorhabditis briggsae CBG09815 N 0.456
CBN09141 Caenorhabditis brenneri CBN09141 N 0.418
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N 0.418
CRE25200 Caenorhabditis remanei CRE25200 N 0.418
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.594
EEL_0000522201 Elaeophora elaphi EEL_0000522201 N 0.587
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.548
fgenesh2_pg.scaffold_137000001 Branchiostoma floridae fgenesh2_pg.scaffold_137000001 N 0.446
GB50847 Apis mellifera GB50847 N 0.418
GPLIN_000847800 Globodera pallida GPLIN_000847800 N 0.477
Hba_20635 Heterorhabditis bacteriophora Hba_20635 N 0.504
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.548
HCOI00569400 Haemonchus contortus HCOI00569400 N 0.548
HHAL002088-PA Halyomorpha halys HHAL002088-PA N 0.418
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.548
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.548
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N 0.418
L596_g22461 Steinernema carpocapsae L596_g22461 N 0.505
L798_00593 Zootermopsis nevadensis L798_00593 N 0.418
L892_g30100 Steinernema scapterisci L892_g30100 N 0.505
L898_g375 Steinernema monticolum L898_g375 N 0.548
LCUP013669 Lucilia cuprina LCUP013669 N 0.430
LDEC003494 Leptinotarsa decemlineata LDEC003494 N 0.418
LOAG_01279 Loa loa LOAG_01279 N 0.587
maker-nMf.1.1.scaf01126-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01126-augustus-gene-0.13 N 0.554
MhA1_Contig1809.frz3.gene8 Meloidogyne hapla MhA1_Contig1809.frz3.gene8 N 0.624
Minc14081 Meloidogyne incognita Minc14081 N 0.554
ML45008a Mnemiopsis leidyi ML45008a N 0.428
nAv.1.0.1.g03900 Acanthocheilonema viteae nAv.1.0.1.g03900 N 0.587
nDi.2.2.2.g02092 Dirofilaria immitis nDi.2.2.2.g02092 N 0.587
NECAME_16117 Necator americanus NECAME_16117 N 0.548
nLs.2.1.2.g01047 Litomosoides sigmodontis nLs.2.1.2.g01047 N 0.587
nOo.2.0.1.g01360 Onchocerca ochengi nOo.2.0.1.g01360 N 0.587
NV11999 Nasonia vitripennis NV11999 N 0.420
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.548
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.548
OFLC_0001285101 Onchocerca flexuosa OFLC_0001285101 N 0.587
PEQ_0000805501 Parascaris equorum PEQ_0000805501 N 0.497
PPA02543 Pristionchus pacificus PPA02543 N 0.444
scaffold237-EXSNAP2012.36 Pristionchus exspectatus scaffold237-EXSNAP2012.36 N 0.444
SMUV_0000644601 Syphacia muris SMUV_0000644601 N 0.594
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 N 0.554
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.548
TC007745 Tribolium castaneum TC007745 N 0.418
TCLT_0000145301 Thelazia callipaeda TCLT_0000145301 N 0.587
TCNE_0001003101 Toxocara canis TCNE_0001003101 N 0.447
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.548
swsn-3 Caenorhabditis elegans WBGene00022182 N 0.463
WBGene00245293 Onchocerca volvulus WBGene00245293 N 0.587
WUBG_07283 Wuchereria bancrofti WUBG_07283 N 0.587
YQE_02381 Dendroctonus ponderosae YQE_02381 N 0.418