fgenesh2_pg.scaffold_137000001 (Branchiostoma floridae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh2_pg.scaffold_137000001 T334142_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_137000001 Sox 52 120

Links

Other Sox family TFs
Other Branchiostoma floridae TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMARCE1 Gasterosteus aculeatus ENSGACG00000018114 N 0.644
AAH41216 Xenopus laevis AAH41216 N 0.638
ISCW021016 Ixodes scapularis ISCW021016 N 0.634
CLEC009203 Cimex lectularius CLEC009203 N 0.633
ENSOCUG00000016848 Oryctolagus cuniculus ENSOCUG00000016848 N 0.631
SMAR004982 Strigamia maritima SMAR004982 N 0.630
AC123471.1 Rattus norvegicus ENSRNOG00000018377 N 0.627
NEMVEDRAFT_v1g177453 Nematostella vectensis NEMVEDRAFT_v1g177453 N 0.626
L798_00593 Zootermopsis nevadensis L798_00593 N 0.620
HHAL007378-PA Halyomorpha halys HHAL007378-PA N 0.620
ACEP21543 Atta cephalotes ACEP21543 N 0.618
GB50847 Apis mellifera GB50847 N 0.618
NV11999 Nasonia vitripennis NV11999 N 0.618
TC007745 Tribolium castaneum TC007745 N 0.618
YQE_02381 Dendroctonus ponderosae YQE_02381 N 0.618
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N 0.618
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N 0.618
LDEC003494 Leptinotarsa decemlineata LDEC003494 N 0.618
TriadG53566 Trichoplax adhaerens TriadG53566 N 0.616
PPAI002058 Phlebotomus papatasi PPAI002058 N 0.615
ENSGMOG00000002045 Gadus morhua ENSGMOG00000002045 N 0.614
smarce1 Oryzias latipes ENSORLG00000018629 N 0.614
ENSPFOG00000009890 Poecilia formosa ENSPFOG00000009890 N 0.614
ENSPFOG00000019561 Poecilia formosa ENSPFOG00000019561 N 0.614
ENSXMAG00000002642 Xiphophorus maculatus ENSXMAG00000002642 N 0.614
DAPPUDRAFT_305068 Daphnia pulex DAPPUDRAFT_305068 N 0.613
ENSCING00000007774 Ciona intestinalis ENSCING00000007774 N 0.609
ACYPI008028 Acyrthosiphon pisum ACYPI008028 N 0.608
ENSONIG00000006293 Oreochromis niloticus ENSONIG00000006293 N 0.607
smarce1 Tetraodon nigroviridis ENSTNIG00000014009 N 0.607
smarce1 Takifugu rubripes ENSTRUG00000012899 N 0.607
HHAL002088-PA Halyomorpha halys HHAL002088-PA N 0.607
Sakowv30017721m.g Saccoglossus kowalevskii Sakowv30017721m.g N 0.604
ENSFCAG00000026463 Felis catus ENSFCAG00000026463 N 0.598
LCUP013669 Lucilia cuprina LCUP013669 N 0.598
CapteG156119 Capitella teleta CapteG156119 N 0.597
CLEC001104 Cimex lectularius CLEC001104 N 0.597
HelroG188630 Helobdella robusta HelroG188630 N 0.596
LLOJ006040 Lutzomyia longipalpis LLOJ006040 N 0.594
CpipJ_CPIJ007400 Culex pipiens CpipJ_CPIJ007400 N 0.586
CpipJ_CPIJ018416 Culex pipiens CpipJ_CPIJ018416 N 0.586
AAEL010903 Aedes aegypti AAEL010903 N 0.586
CPIJ007400 Culex quinquefasciatus CPIJ007400 N 0.586
CPIJ018416 Culex quinquefasciatus CPIJ018416 N 0.586
SPU_009282 Strongylocentrotus purpuratus SPU_009282 N 0.584
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N 0.569
GF19131 Drosophila ananassae FBgn0096142 N 0.560
GG18291 Drosophila erecta FBgn0110507 N 0.560
GH12291 Drosophila grimshawi FBgn0119770 N 0.560
GK25765 Drosophila willistoni FBgn0227724 N 0.560
GE15824 Drosophila yakuba FBgn0233388 N 0.560
ENSCSAVG00000010367 Ciona savignyi ENSCSAVG00000010367 N 0.559
ADAC004863 Anopheles darlingi ADAC004863 N 0.558
AGAP001994 Anopheles gambiae AGAP001994 N 0.558
BGIBMGA009228 Bombyx mori BGIBMGA009228 N 0.558
ENSGGOG00000024929 Gorilla gorilla ENSGGOG00000024929 N 0.558
AALB002196 Anopheles albimanus AALB002196 N 0.558
AARA006951 Anopheles arabiensis AARA006951 N 0.558
AATE020748 Anopheles atroparvus AATE020748 N 0.558
ACHR000824 Anopheles christyi ACHR000824 N 0.558
ACOM023536 Anopheles coluzzii ACOM023536 N 0.558
ACUA002517 Anopheles culicifacies ACUA002517 N 0.558
ADIR010513 Anopheles dirus ADIR010513 N 0.558
AEPI007457 Anopheles epiroticus AEPI007457 N 0.558
AFAF004631 Anopheles farauti AFAF004631 N 0.558
AFUN008276 Anopheles funestus AFUN008276 N 0.558
AMAM007470 Anopheles maculatus AMAM007470 N 0.558
AMEC010472 Anopheles melas AMEC010472 N 0.558
AMEM015770 Anopheles merus AMEM015770 N 0.558
AMIN003302 Anopheles minimus AMIN003302 N 0.558
AQUA007127 Anopheles quadriannulatus AQUA007127 N 0.558
ASIS021704 Anopheles sinensis ASIS021704 N 0.558
ASTEI00336 Anopheles stephensi ASTEI00336 N 0.558
dalao Drosophila melanogaster FBgn0030093 N 0.555
GM13722 Drosophila sechellia FBgn0168653 N 0.555
GD16931 Drosophila simulans FBgn0188511 N 0.555
ENSPPYG00000012585 Pongo abelii ENSPPYG00000012585 N 0.552
HDID_0000207001 Hymenolepis diminuta HDID_0000207001 N 0.548
MCOS_0000928101 Mesocestoides corti MCOS_0000928101 N 0.548
PXEA_0001727801 Protopolystoma xenopodis PXEA_0001727801 N 0.548
LotgiG111061 Lottia gigantea LotgiG111061 N 0.541
Smp_154640 Schistosoma mansoni Smp_154640 N 0.541
Sjc_0000110 Schistosoma japonicum Sjc_0000110 N 0.541
A_05744 Schistosoma haematobium A_05744 N 0.541
D915_15883 Fasciola hepatica D915_15883 N 0.541
SCUD_0000923501 Schistosoma curassoni SCUD_0000923501 N 0.541
SMTD_0000014601 Schistosoma mattheei SMTD_0000014601 N 0.541
SROB_0000607501 Schistosoma rodhaini SROB_0000607501 N 0.541
T265_02983 Opisthorchis viverrini T265_02983 N 0.541
SMU15005679 Schmidtea mediterranea SMU15005679 N 0.540
ECANG7_05376 Echinococcus canadensis ECANG7_05376 N 0.540
EmuJ_000113200 Echinococcus multilocularis EmuJ_000113200 N 0.540
TASK_0000875901 Taenia asiatica TASK_0000875901 N 0.540
TsM_000047400 Taenia solium TsM_000047400 N 0.540
MDOA009352 Musca domestica MDOA009352 N 0.534
GL26801 Drosophila persimilis FBgn0164382 N 0.527
GA26137 Drosophila pseudoobscura FBgn0247513 N 0.527
ENSGGOG00000026277 Gorilla gorilla ENSGGOG00000026277 N 0.526
HMEL010720 Heliconius melpomene HMEL010720 N 0.526
KGM_12870 Danaus plexippus KGM_12870 N 0.526
XP_002158206.1 Hydra magnipapillata XP_002158206.1 N 0.524
ALUE_0000987201 Ascaris lumbricoides ALUE_0000987201 N 0.523
ASIM_0001578601 Anisakis simplex ASIM_0001578601 N 0.523
ASIM_0001639001 Anisakis simplex ASIM_0001639001 N 0.523
ASU_02248 Ascaris suum ASU_02248 N 0.523
SMUV_0000644601 Syphacia muris SMUV_0000644601 N 0.523
GI15536 Drosophila mojavensis FBgn0138285 N 0.522
GJ14880 Drosophila virilis FBgn0202084 N 0.522
D918_01415 Trichuris suis D918_01415 N 0.517
TMUE_s0023006500 Trichuris muris TMUE_s0023006500 N 0.517
TTRE_0000149701 Trichuris trichiura TTRE_0000149701 N 0.517
SMU15025606 Schmidtea mediterranea SMU15025606 N 0.511
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.491
SSLN_0001888901 Schistocephalus solidus SSLN_0001888901 N 0.489
ML45008a Mnemiopsis leidyi ML45008a N 0.487
WUBG_07283 Wuchereria bancrofti WUBG_07283 N 0.484
Bm7076 Brugia malayi Bm7076 N 0.484
LOAG_01279 Loa loa LOAG_01279 N 0.484
WBGene00245293 Onchocerca volvulus WBGene00245293 N 0.484
EEL_0000522201 Elaeophora elaphi EEL_0000522201 N 0.484
nAv.1.0.1.g03900 Acanthocheilonema viteae nAv.1.0.1.g03900 N 0.484
nDi.2.2.2.g02092 Dirofilaria immitis nDi.2.2.2.g02092 N 0.484
nLs.2.1.2.g01047 Litomosoides sigmodontis nLs.2.1.2.g01047 N 0.484
nOo.2.0.1.g01360 Onchocerca ochengi nOo.2.0.1.g01360 N 0.484
OFLC_0001285101 Onchocerca flexuosa OFLC_0001285101 N 0.484
TCLT_0000145301 Thelazia callipaeda TCLT_0000145301 N 0.484
L889_g3706 Steinernema feltiae L889_g3706 N 0.478
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.477
csin103376 Clonorchis sinensis csin103376 N 0.472
L898_g375 Steinernema monticolum L898_g375 N 0.462
L596_g22461 Steinernema carpocapsae L596_g22461 N 0.455
L892_g30100 Steinernema scapterisci L892_g30100 N 0.455
Aqu1.224100 Amphimedon queenslandica Aqu1.224100 N 0.452
GPLIN_000239300 Globodera pallida GPLIN_000239300 N 0.446
EHI_179340 Entamoeba histolytica EHI_179340 N 0.438
EDI_110640 Entamoeba dispar EDI_110640 N 0.438
PEQ_0000805501 Parascaris equorum PEQ_0000805501 N 0.419
CLEC007658 Cimex lectularius CLEC007658 N 0.418