AC123471.1 (Rattus norvegicus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSRNOG00000018377 T329041_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000075478 Sox 31 98

Links

Other Sox family TFs
Other Rattus norvegicus TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAH41216 Xenopus laevis AAH41216 N 0.731
ENSOCUG00000016848 Oryctolagus cuniculus ENSOCUG00000016848 N 0.724
SMARCE1 Gasterosteus aculeatus ENSGACG00000018114 N 0.712
NEMVEDRAFT_v1g177453 Nematostella vectensis NEMVEDRAFT_v1g177453 N 0.707
ENSGMOG00000002045 Gadus morhua ENSGMOG00000002045 N 0.706
smarce1 Oryzias latipes ENSORLG00000018629 N 0.706
ENSPFOG00000009890 Poecilia formosa ENSPFOG00000009890 N 0.706
ENSPFOG00000019561 Poecilia formosa ENSPFOG00000019561 N 0.706
ENSXMAG00000002642 Xiphophorus maculatus ENSXMAG00000002642 N 0.706
ACEP21543 Atta cephalotes ACEP21543 N 0.701
GB50847 Apis mellifera GB50847 N 0.701
YQE_02381 Dendroctonus ponderosae YQE_02381 N 0.701
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N 0.701
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N 0.701
ENSONIG00000006293 Oreochromis niloticus ENSONIG00000006293 N 0.700
smarce1 Tetraodon nigroviridis ENSTNIG00000014009 N 0.700
smarce1 Takifugu rubripes ENSTRUG00000012899 N 0.700
DAPPUDRAFT_305068 Daphnia pulex DAPPUDRAFT_305068 N 0.699
L798_00593 Zootermopsis nevadensis L798_00593 N 0.699
NV11999 Nasonia vitripennis NV11999 N 0.699
TC007745 Tribolium castaneum TC007745 N 0.699
LDEC003494 Leptinotarsa decemlineata LDEC003494 N 0.699
PPAI002058 Phlebotomus papatasi PPAI002058 N 0.699
ENSFCAG00000026463 Felis catus ENSFCAG00000026463 N 0.696
ISCW021016 Ixodes scapularis ISCW021016 N 0.695
HHAL002088-PA Halyomorpha halys HHAL002088-PA N 0.693
Sakowv30017721m.g Saccoglossus kowalevskii Sakowv30017721m.g N 0.690
HHAL007378-PA Halyomorpha halys HHAL007378-PA N 0.689
SMAR004982 Strigamia maritima SMAR004982 N 0.687
CLEC009203 Cimex lectularius CLEC009203 N 0.687
CpipJ_CPIJ007400 Culex pipiens CpipJ_CPIJ007400 N 0.685
CpipJ_CPIJ018416 Culex pipiens CpipJ_CPIJ018416 N 0.685
AAEL010903 Aedes aegypti AAEL010903 N 0.685
CPIJ007400 Culex quinquefasciatus CPIJ007400 N 0.685
CPIJ018416 Culex quinquefasciatus CPIJ018416 N 0.685
LLOJ006040 Lutzomyia longipalpis LLOJ006040 N 0.682
CapteG156119 Capitella teleta CapteG156119 N 0.681
HelroG188630 Helobdella robusta HelroG188630 N 0.676
ACYPI008028 Acyrthosiphon pisum ACYPI008028 N 0.669
ENSCING00000007774 Ciona intestinalis ENSCING00000007774 N 0.663
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N 0.662
SPU_009282 Strongylocentrotus purpuratus SPU_009282 N 0.658
ADAC004863 Anopheles darlingi ADAC004863 N 0.657
AGAP001994 Anopheles gambiae AGAP001994 N 0.657
AALB002196 Anopheles albimanus AALB002196 N 0.657
AARA006951 Anopheles arabiensis AARA006951 N 0.657
AATE020748 Anopheles atroparvus AATE020748 N 0.657
ACHR000824 Anopheles christyi ACHR000824 N 0.657
ACOM023536 Anopheles coluzzii ACOM023536 N 0.657
ACUA002517 Anopheles culicifacies ACUA002517 N 0.657
ADIR010513 Anopheles dirus ADIR010513 N 0.657
AEPI007457 Anopheles epiroticus AEPI007457 N 0.657
AFAF004631 Anopheles farauti AFAF004631 N 0.657
AFUN008276 Anopheles funestus AFUN008276 N 0.657
AMAM007470 Anopheles maculatus AMAM007470 N 0.657
AMEC010472 Anopheles melas AMEC010472 N 0.657
AMEM015770 Anopheles merus AMEM015770 N 0.657
AMIN003302 Anopheles minimus AMIN003302 N 0.657
AQUA007127 Anopheles quadriannulatus AQUA007127 N 0.657
ASIS021704 Anopheles sinensis ASIS021704 N 0.657
ASTEI00336 Anopheles stephensi ASTEI00336 N 0.657
CLEC001104 Cimex lectularius CLEC001104 N 0.653
ENSGGOG00000024929 Gorilla gorilla ENSGGOG00000024929 N 0.650
ENSPPYG00000012585 Pongo abelii ENSPPYG00000012585 N 0.632
fgenesh2_pg.scaffold_137000001 Branchiostoma floridae fgenesh2_pg.scaffold_137000001 N 0.627
PXEA_0001727801 Protopolystoma xenopodis PXEA_0001727801 N 0.627
HDID_0000207001 Hymenolepis diminuta HDID_0000207001 N 0.622
MCOS_0000928101 Mesocestoides corti MCOS_0000928101 N 0.622
Smp_154640 Schistosoma mansoni Smp_154640 N 0.620
Sjc_0000110 Schistosoma japonicum Sjc_0000110 N 0.620
A_05744 Schistosoma haematobium A_05744 N 0.620
D915_15883 Fasciola hepatica D915_15883 N 0.620
SCUD_0000923501 Schistosoma curassoni SCUD_0000923501 N 0.620
SMTD_0000014601 Schistosoma mattheei SMTD_0000014601 N 0.620
SROB_0000607501 Schistosoma rodhaini SROB_0000607501 N 0.620
T265_02983 Opisthorchis viverrini T265_02983 N 0.620
LotgiG111061 Lottia gigantea LotgiG111061 N 0.615
SMU15005679 Schmidtea mediterranea SMU15005679 N 0.614
ECANG7_05376 Echinococcus canadensis ECANG7_05376 N 0.614
EmuJ_000113200 Echinococcus multilocularis EmuJ_000113200 N 0.614
TASK_0000875901 Taenia asiatica TASK_0000875901 N 0.614
TsM_000047400 Taenia solium TsM_000047400 N 0.614
ENSCSAVG00000010367 Ciona savignyi ENSCSAVG00000010367 N 0.613
HMEL010720 Heliconius melpomene HMEL010720 N 0.612
KGM_12870 Danaus plexippus KGM_12870 N 0.612
LCUP013669 Lucilia cuprina LCUP013669 N 0.612
GL26801 Drosophila persimilis FBgn0164382 N 0.609
GA26137 Drosophila pseudoobscura FBgn0247513 N 0.609
ENSGGOG00000026277 Gorilla gorilla ENSGGOG00000026277 N 0.607
TriadG53566 Trichoplax adhaerens TriadG53566 N 0.598
D918_01415 Trichuris suis D918_01415 N 0.591
TMUE_s0023006500 Trichuris muris TMUE_s0023006500 N 0.591
TTRE_0000149701 Trichuris trichiura TTRE_0000149701 N 0.591
SMU15025606 Schmidtea mediterranea SMU15025606 N 0.585
MDOA009352 Musca domestica MDOA009352 N 0.583
BGIBMGA009228 Bombyx mori BGIBMGA009228 N 0.580
dalao Drosophila melanogaster FBgn0030093 N 0.579
GG18291 Drosophila erecta FBgn0110507 N 0.579
GM13722 Drosophila sechellia FBgn0168653 N 0.579
GD16931 Drosophila simulans FBgn0188511 N 0.579
GE15824 Drosophila yakuba FBgn0233388 N 0.579
GF19131 Drosophila ananassae FBgn0096142 N 0.577
GH12291 Drosophila grimshawi FBgn0119770 N 0.577
GK25765 Drosophila willistoni FBgn0227724 N 0.577
SSLN_0001888901 Schistocephalus solidus SSLN_0001888901 N 0.563
csin103376 Clonorchis sinensis csin103376 N 0.551
GI15536 Drosophila mojavensis FBgn0138285 N 0.539
GJ14880 Drosophila virilis FBgn0202084 N 0.539
XP_002158206.1 Hydra magnipapillata XP_002158206.1 N 0.529
Aqu1.224100 Amphimedon queenslandica Aqu1.224100 N 0.502
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.493
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N 0.492
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.492
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.492
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.492
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.492
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.492
HCOI00569400 Haemonchus contortus HCOI00569400 N 0.492
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.492
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.492
NECAME_16117 Necator americanus NECAME_16117 N 0.492
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.492
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.492
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.492
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.492
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.479
CLEC007658 Cimex lectularius CLEC007658 N 0.475
WUBG_07283 Wuchereria bancrofti WUBG_07283 N 0.472
Bm7076 Brugia malayi Bm7076 N 0.472
LOAG_01279 Loa loa LOAG_01279 N 0.472
WBGene00245293 Onchocerca volvulus WBGene00245293 N 0.472
EEL_0000522201 Elaeophora elaphi EEL_0000522201 N 0.472
nAv.1.0.1.g03900 Acanthocheilonema viteae nAv.1.0.1.g03900 N 0.472
nDi.2.2.2.g02092 Dirofilaria immitis nDi.2.2.2.g02092 N 0.472
nLs.2.1.2.g01047 Litomosoides sigmodontis nLs.2.1.2.g01047 N 0.472
nOo.2.0.1.g01360 Onchocerca ochengi nOo.2.0.1.g01360 N 0.472
OFLC_0001285101 Onchocerca flexuosa OFLC_0001285101 N 0.472
TCLT_0000145301 Thelazia callipaeda TCLT_0000145301 N 0.472
MhA1_Contig1809.frz3.gene8 Meloidogyne hapla MhA1_Contig1809.frz3.gene8 N 0.470
ML45008a Mnemiopsis leidyi ML45008a N 0.467
L889_g3706 Steinernema feltiae L889_g3706 N 0.466
Minc14081 Meloidogyne incognita Minc14081 N 0.452
maker-nMf.1.1.scaf01126-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01126-augustus-gene-0.13 N 0.452
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 N 0.452
CBG09815 Caenorhabditis briggsae CBG09815 N 0.447
ALUE_0000987201 Ascaris lumbricoides ALUE_0000987201 N 0.447
ASIM_0001578601 Anisakis simplex ASIM_0001578601 N 0.447
ASIM_0001639001 Anisakis simplex ASIM_0001639001 N 0.447
ASU_02248 Ascaris suum ASU_02248 N 0.447
SMUV_0000644601 Syphacia muris SMUV_0000644601 N 0.447
swsn-3 Caenorhabditis elegans WBGene00022182 N 0.441
RSKR_0000347900 Rhabditophanes kr3021 RSKR_0000347900 N 0.434
PPA02543 Pristionchus pacificus PPA02543 N 0.426
scaffold237-EXSNAP2012.36 Pristionchus exspectatus scaffold237-EXSNAP2012.36 N 0.426
L898_g375 Steinernema monticolum L898_g375 N 0.418