SMARCE1 (Gasterosteus aculeatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSGACG00000018114 T328116_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000023934 Sox 1 64
ENSGACP00000023938 Sox 31 99

Links

Other Sox family TFs
Other Gasterosteus aculeatus TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N 0.723
AAH41216 Xenopus laevis AAH41216 N 0.723
ENSOCUG00000016848 Oryctolagus cuniculus ENSOCUG00000016848 N 0.716
AC123471.1 Rattus norvegicus ENSRNOG00000018377 N 0.712
ISCW021016 Ixodes scapularis ISCW021016 N 0.712
ENSGMOG00000002045 Gadus morhua ENSGMOG00000002045 N 0.711
smarce1 Oryzias latipes ENSORLG00000018629 N 0.711
ENSPFOG00000009890 Poecilia formosa ENSPFOG00000009890 N 0.711
ENSPFOG00000019561 Poecilia formosa ENSPFOG00000019561 N 0.711
ENSXMAG00000002642 Xiphophorus maculatus ENSXMAG00000002642 N 0.711
ENSONIG00000006293 Oreochromis niloticus ENSONIG00000006293 N 0.704
smarce1 Tetraodon nigroviridis ENSTNIG00000014009 N 0.704
smarce1 Takifugu rubripes ENSTRUG00000012899 N 0.704
SMAR004982 Strigamia maritima SMAR004982 N 0.704
CLEC009203 Cimex lectularius CLEC009203 N 0.704
NEMVEDRAFT_v1g177453 Nematostella vectensis NEMVEDRAFT_v1g177453 N 0.699
HHAL002088-PA Halyomorpha halys HHAL002088-PA N 0.697
HHAL007378-PA Halyomorpha halys HHAL007378-PA N 0.695
ACEP21543 Atta cephalotes ACEP21543 N 0.693
GB50847 Apis mellifera GB50847 N 0.693
YQE_02381 Dendroctonus ponderosae YQE_02381 N 0.693
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N 0.693
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N 0.693
DAPPUDRAFT_305068 Daphnia pulex DAPPUDRAFT_305068 N 0.691
L798_00593 Zootermopsis nevadensis L798_00593 N 0.691
NV11999 Nasonia vitripennis NV11999 N 0.691
TC007745 Tribolium castaneum TC007745 N 0.691
LDEC003494 Leptinotarsa decemlineata LDEC003494 N 0.691
PPAI002058 Phlebotomus papatasi PPAI002058 N 0.691
Sakowv30017721m.g Saccoglossus kowalevskii Sakowv30017721m.g N 0.688
ACYPI008028 Acyrthosiphon pisum ACYPI008028 N 0.686
ENSFCAG00000026463 Felis catus ENSFCAG00000026463 N 0.677
LotgiG111061 Lottia gigantea LotgiG111061 N 0.676
LLOJ006040 Lutzomyia longipalpis LLOJ006040 N 0.674
CapteG156119 Capitella teleta CapteG156119 N 0.673
CLEC001104 Cimex lectularius CLEC001104 N 0.670
HelroG188630 Helobdella robusta HelroG188630 N 0.668
CpipJ_CPIJ007400 Culex pipiens CpipJ_CPIJ007400 N 0.666
CpipJ_CPIJ018416 Culex pipiens CpipJ_CPIJ018416 N 0.666
AAEL010903 Aedes aegypti AAEL010903 N 0.666
CPIJ007400 Culex quinquefasciatus CPIJ007400 N 0.666
CPIJ018416 Culex quinquefasciatus CPIJ018416 N 0.666
ENSCING00000007774 Ciona intestinalis ENSCING00000007774 N 0.661
SPU_009282 Strongylocentrotus purpuratus SPU_009282 N 0.656
ENSGGOG00000024929 Gorilla gorilla ENSGGOG00000024929 N 0.648
fgenesh2_pg.scaffold_137000001 Branchiostoma floridae fgenesh2_pg.scaffold_137000001 N 0.644
ENSPPYG00000012585 Pongo abelii ENSPPYG00000012585 N 0.643
ADAC004863 Anopheles darlingi ADAC004863 N 0.638
AGAP001994 Anopheles gambiae AGAP001994 N 0.638
AALB002196 Anopheles albimanus AALB002196 N 0.638
AARA006951 Anopheles arabiensis AARA006951 N 0.638
AATE020748 Anopheles atroparvus AATE020748 N 0.638
ACHR000824 Anopheles christyi ACHR000824 N 0.638
ACOM023536 Anopheles coluzzii ACOM023536 N 0.638
ACUA002517 Anopheles culicifacies ACUA002517 N 0.638
ADIR010513 Anopheles dirus ADIR010513 N 0.638
AEPI007457 Anopheles epiroticus AEPI007457 N 0.638
AFAF004631 Anopheles farauti AFAF004631 N 0.638
AFUN008276 Anopheles funestus AFUN008276 N 0.638
AMAM007470 Anopheles maculatus AMAM007470 N 0.638
AMEC010472 Anopheles melas AMEC010472 N 0.638
AMEM015770 Anopheles merus AMEM015770 N 0.638
AMIN003302 Anopheles minimus AMIN003302 N 0.638
AQUA007127 Anopheles quadriannulatus AQUA007127 N 0.638
ASIS021704 Anopheles sinensis ASIS021704 N 0.638
ASTEI00336 Anopheles stephensi ASTEI00336 N 0.638
SSLN_0001888901 Schistocephalus solidus SSLN_0001888901 N 0.630
PXEA_0001727801 Protopolystoma xenopodis PXEA_0001727801 N 0.625
HDID_0000207001 Hymenolepis diminuta HDID_0000207001 N 0.620
MCOS_0000928101 Mesocestoides corti MCOS_0000928101 N 0.620
Smp_154640 Schistosoma mansoni Smp_154640 N 0.618
Sjc_0000110 Schistosoma japonicum Sjc_0000110 N 0.618
A_05744 Schistosoma haematobium A_05744 N 0.618
csin103376 Clonorchis sinensis csin103376 N 0.618
D915_15883 Fasciola hepatica D915_15883 N 0.618
SCUD_0000923501 Schistosoma curassoni SCUD_0000923501 N 0.618
SMTD_0000014601 Schistosoma mattheei SMTD_0000014601 N 0.618
SROB_0000607501 Schistosoma rodhaini SROB_0000607501 N 0.618
T265_02983 Opisthorchis viverrini T265_02983 N 0.618
ENSGGOG00000026277 Gorilla gorilla ENSGGOG00000026277 N 0.617
TriadG53566 Trichoplax adhaerens TriadG53566 N 0.615
SMU15005679 Schmidtea mediterranea SMU15005679 N 0.612
ECANG7_05376 Echinococcus canadensis ECANG7_05376 N 0.612
EmuJ_000113200 Echinococcus multilocularis EmuJ_000113200 N 0.612
TASK_0000875901 Taenia asiatica TASK_0000875901 N 0.612
TsM_000047400 Taenia solium TsM_000047400 N 0.612
ENSCSAVG00000010367 Ciona savignyi ENSCSAVG00000010367 N 0.611
HMEL010720 Heliconius melpomene HMEL010720 N 0.610
KGM_12870 Danaus plexippus KGM_12870 N 0.610
LCUP013669 Lucilia cuprina LCUP013669 N 0.604
GL26801 Drosophila persimilis FBgn0164382 N 0.601
GA26137 Drosophila pseudoobscura FBgn0247513 N 0.601
D918_01415 Trichuris suis D918_01415 N 0.589
TMUE_s0023006500 Trichuris muris TMUE_s0023006500 N 0.589
TTRE_0000149701 Trichuris trichiura TTRE_0000149701 N 0.589
SMU15025606 Schmidtea mediterranea SMU15025606 N 0.583
BGIBMGA009228 Bombyx mori BGIBMGA009228 N 0.578
MDOA009352 Musca domestica MDOA009352 N 0.575
dalao Drosophila melanogaster FBgn0030093 N 0.571
GG18291 Drosophila erecta FBgn0110507 N 0.571
GM13722 Drosophila sechellia FBgn0168653 N 0.571
GD16931 Drosophila simulans FBgn0188511 N 0.571
GE15824 Drosophila yakuba FBgn0233388 N 0.571
GF19131 Drosophila ananassae FBgn0096142 N 0.569
GH12291 Drosophila grimshawi FBgn0119770 N 0.569
GK25765 Drosophila willistoni FBgn0227724 N 0.569
GI15536 Drosophila mojavensis FBgn0138285 N 0.531
GJ14880 Drosophila virilis FBgn0202084 N 0.531
XP_002158206.1 Hydra magnipapillata XP_002158206.1 N 0.527
CLEC007658 Cimex lectularius CLEC007658 N 0.492
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.491
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N 0.490
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.490
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.490
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.490
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.490
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.490
HCOI00569400 Haemonchus contortus HCOI00569400 N 0.490
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.490
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.490
NECAME_16117 Necator americanus NECAME_16117 N 0.490
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.490
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.490
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.490
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.490
Aqu1.224100 Amphimedon queenslandica Aqu1.224100 N 0.489
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.477
MCINX003696 Melitaea cinxia MCINX003696 N 0.476
BGLB013830 Biomphalaria glabrata BGLB013830 N 0.471
WUBG_07283 Wuchereria bancrofti WUBG_07283 N 0.470
Bm7076 Brugia malayi Bm7076 N 0.470
LOAG_01279 Loa loa LOAG_01279 N 0.470
WBGene00245293 Onchocerca volvulus WBGene00245293 N 0.470
EEL_0000522201 Elaeophora elaphi EEL_0000522201 N 0.470
nAv.1.0.1.g03900 Acanthocheilonema viteae nAv.1.0.1.g03900 N 0.470
nDi.2.2.2.g02092 Dirofilaria immitis nDi.2.2.2.g02092 N 0.470
nLs.2.1.2.g01047 Litomosoides sigmodontis nLs.2.1.2.g01047 N 0.470
nOo.2.0.1.g01360 Onchocerca ochengi nOo.2.0.1.g01360 N 0.470
OFLC_0001285101 Onchocerca flexuosa OFLC_0001285101 N 0.470
TCLT_0000145301 Thelazia callipaeda TCLT_0000145301 N 0.470
MhA1_Contig1809.frz3.gene8 Meloidogyne hapla MhA1_Contig1809.frz3.gene8 N 0.469
ML45008a Mnemiopsis leidyi ML45008a N 0.467
DILT_0001977801 Diphyllobothrium latum DILT_0001977801 N 0.463
L889_g3706 Steinernema feltiae L889_g3706 N 0.458
Minc14081 Meloidogyne incognita Minc14081 N 0.450
maker-nMf.1.1.scaf01126-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01126-augustus-gene-0.13 N 0.450
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 N 0.450
CBG09815 Caenorhabditis briggsae CBG09815 N 0.445
ALUE_0000987201 Ascaris lumbricoides ALUE_0000987201 N 0.445
ASIM_0001578601 Anisakis simplex ASIM_0001578601 N 0.445
ASIM_0001639001 Anisakis simplex ASIM_0001639001 N 0.445
ASU_02248 Ascaris suum ASU_02248 N 0.445
SMUV_0000644601 Syphacia muris SMUV_0000644601 N 0.445
swsn-3 Caenorhabditis elegans WBGene00022182 N 0.439
RSKR_0000347900 Rhabditophanes kr3021 RSKR_0000347900 N 0.432
D917_01243 Trichinella nativa D917_01243 N 0.428
D917_08464 Trichinella nativa D917_08464 N 0.428
PPA02543 Pristionchus pacificus PPA02543 N 0.424
scaffold237-EXSNAP2012.36 Pristionchus exspectatus scaffold237-EXSNAP2012.36 N 0.424
TTAC_0000838901 Hydatigera taeniaeformis TTAC_0000838901 N 0.416