D917_01243 (Trichinella nativa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 D917_01243 T336156_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
D917_01243 Sox 1 55

Links

Other Sox family TFs
Other Trichinella nativa TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
D917_08464 Trichinella nativa D917_08464 N 0.741
MCINX003696 Melitaea cinxia MCINX003696 N 0.607
BGLB013830 Biomphalaria glabrata BGLB013830 N 0.565
SVUK_0000827101 Strongylus vulgaris SVUK_0000827101 N 0.559
LCUP018488 Lucilia cuprina LCUP018488 N 0.551
GPLIN_000847800 Globodera pallida GPLIN_000847800 N 0.550
EFA77534.1 Polysphondylium pallidum EFA77534.1 N 0.544
DILT_0001977801 Diphyllobothrium latum DILT_0001977801 N 0.535
TTAC_0000838901 Hydatigera taeniaeformis TTAC_0000838901 N 0.532
Traes_7BL_F45C15FA2 Triticum aestivum Traes_7BL_F45C15FA2 N 0.507
MLOC_68913 Hordeum vulgare MLOC_68913 N 0.497
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I 0.490
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.490
gw1.88.46.1 Fragilariopsis cylindrus gw1.88.46.1 N 0.486
Traes_7AL_364A6E96F Triticum aestivum Traes_7AL_364A6E96F N 0.478
Traes_7DL_0CEFCB39D Triticum aestivum Traes_7DL_0CEFCB39D N 0.478
PDK_20s1781681g001 Phoenix dactylifera PDK_20s1781681g001 N 0.478
MDP0000242568 Malus domestica MDP0000242568 I 0.463
Gorai.011G042300 Gossypium raimondii Gorai.011G042300 N 0.461
HelroG167700 Helobdella robusta HelroG167700 N 0.454
D918_01415 Trichuris suis D918_01415 N 0.453
TMUE_s0023006500 Trichuris muris TMUE_s0023006500 N 0.453
TTRE_0000149701 Trichuris trichiura TTRE_0000149701 N 0.453
Traes_3DL_21C50DDF5 Triticum aestivum Traes_3DL_21C50DDF5 N 0.450
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.448
UV8b_5742 Ustilaginoidea virens UV8b_5742 N 0.445
CTRG_00206 Candida tropicalis CTRG_00206 I 0.442
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N 0.441
PFICI_01816 Pestalotiopsis fici PFICI_01816 N 0.441
Cob_06475 Colletotrichum orbiculare Cob_06475 N 0.438
CHGG_01519 Chaetomium globosum CHGG_01519 I 0.432
MAC_01051 Metarhizium acridum MAC_01051 N 0.432
SMARCE1 Gasterosteus aculeatus ENSGACG00000018114 N 0.428
HMG20A Callithrix jacchus ENSCJAG00000011131 I 0.424
HMG20B Pan troglodytes ENSPTRG00000010268 I 0.424
W97_04494 Coniosporium apollinis W97_04494 I 0.423
LEMA_P074670.1 Leptosphaeria maculans LEMA_P074670.1 I 0.417
SBAD_0001127201 Soboliphyme baturini SBAD_0001127201 N 0.416