CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCING00000007774
(
Ciona intestinalis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSCING00000007774
T327694_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCINP00000015936
Sox
63
131
PEKPLMAYMRYSRKVWDEVKANQPDLKLWEIGKIIGKMWRELPSADKQVYNAEYESEKGEYQELLKSYH
Links
Other
Sox
family TFs
Other
Ciona intestinalis
TFs
150 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP21543
Atta cephalotes
ACEP21543
N
0.681
DAPPUDRAFT_305068
Daphnia pulex
DAPPUDRAFT_305068
N
0.681
GB50847
Apis mellifera
GB50847
N
0.681
L798_00593
Zootermopsis nevadensis
L798_00593
N
0.681
NV11999
Nasonia vitripennis
NV11999
N
0.681
TC007745
Tribolium castaneum
TC007745
N
0.681
YQE_02381
Dendroctonus ponderosae
YQE_02381
N
0.681
Cflo_00654--XP_395543.3_APIME
Camponotus floridanus
Cflo_00654--XP_395543.3_APIME
N
0.681
Hsal_01302--XP_395543.3_APIME
Harpegnathos saltator
Hsal_01302--XP_395543.3_APIME
N
0.681
HHAL002088-PA
Halyomorpha halys
HHAL002088-PA
N
0.681
LDEC003494
Leptinotarsa decemlineata
LDEC003494
N
0.681
ISCW021016
Ixodes scapularis
ISCW021016
N
0.677
ENSGMOG00000002045
Gadus morhua
ENSGMOG00000002045
N
0.675
ENSONIG00000006293
Oreochromis niloticus
ENSONIG00000006293
N
0.675
smarce1
Oryzias latipes
ENSORLG00000018629
N
0.675
ENSPFOG00000009890
Poecilia formosa
ENSPFOG00000009890
N
0.675
ENSPFOG00000019561
Poecilia formosa
ENSPFOG00000019561
N
0.675
smarce1
Tetraodon nigroviridis
ENSTNIG00000014009
N
0.675
smarce1
Takifugu rubripes
ENSTRUG00000012899
N
0.675
ENSXMAG00000002642
Xiphophorus maculatus
ENSXMAG00000002642
N
0.675
PPAI002058
Phlebotomus papatasi
PPAI002058
N
0.675
NEMVEDRAFT_v1g177453
Nematostella vectensis
NEMVEDRAFT_v1g177453
N
0.673
AAH41216
Xenopus laevis
AAH41216
N
0.673
CLEC009203
Cimex lectularius
CLEC009203
N
0.669
ENSCSAVG00000010367
Ciona savignyi
ENSCSAVG00000010367
N
0.668
ENSOCUG00000016848
Oryctolagus cuniculus
ENSOCUG00000016848
N
0.667
AC123471.1
Rattus norvegicus
ENSRNOG00000018377
N
0.663
SMAR004982
Strigamia maritima
SMAR004982
N
0.662
SMARCE1
Gasterosteus aculeatus
ENSGACG00000018114
N
0.661
HHAL007378-PA
Halyomorpha halys
HHAL007378-PA
N
0.658
LLOJ006040
Lutzomyia longipalpis
LLOJ006040
N
0.656
CpipJ_CPIJ007400
Culex pipiens
CpipJ_CPIJ007400
N
0.652
CpipJ_CPIJ018416
Culex pipiens
CpipJ_CPIJ018416
N
0.652
AAEL010903
Aedes aegypti
AAEL010903
N
0.652
CPIJ007400
Culex quinquefasciatus
CPIJ007400
N
0.652
CPIJ018416
Culex quinquefasciatus
CPIJ018416
N
0.652
Sakowv30017721m.g
Saccoglossus kowalevskii
Sakowv30017721m.g
N
0.652
SPU_009282
Strongylocentrotus purpuratus
SPU_009282
N
0.646
HelroG188630
Helobdella robusta
HelroG188630
N
0.637
CLEC001104
Cimex lectularius
CLEC001104
N
0.636
CapteG156119
Capitella teleta
CapteG156119
N
0.633
ACYPI008028
Acyrthosiphon pisum
ACYPI008028
N
0.632
ENSFCAG00000026463
Felis catus
ENSFCAG00000026463
N
0.628
MCOS_0000928101
Mesocestoides corti
MCOS_0000928101
N
0.617
LCUP013669
Lucilia cuprina
LCUP013669
N
0.613
HDID_0000207001
Hymenolepis diminuta
HDID_0000207001
N
0.611
PXEA_0001727801
Protopolystoma xenopodis
PXEA_0001727801
N
0.611
fgenesh2_pg.scaffold_137000001
Branchiostoma floridae
fgenesh2_pg.scaffold_137000001
N
0.609
ENSGGOG00000024929
Gorilla gorilla
ENSGGOG00000024929
N
0.606
Smp_154640
Schistosoma mansoni
Smp_154640
N
0.606
Sjc_0000110
Schistosoma japonicum
Sjc_0000110
N
0.606
A_05744
Schistosoma haematobium
A_05744
N
0.606
SCUD_0000923501
Schistosoma curassoni
SCUD_0000923501
N
0.606
SMTD_0000014601
Schistosoma mattheei
SMTD_0000014601
N
0.606
SROB_0000607501
Schistosoma rodhaini
SROB_0000607501
N
0.606
ADAC004863
Anopheles darlingi
ADAC004863
N
0.605
AGAP001994
Anopheles gambiae
AGAP001994
N
0.605
ENSCJAG00000006608
Callithrix jacchus
ENSCJAG00000006608
N
0.605
AALB002196
Anopheles albimanus
AALB002196
N
0.605
AARA006951
Anopheles arabiensis
AARA006951
N
0.605
AATE020748
Anopheles atroparvus
AATE020748
N
0.605
ACHR000824
Anopheles christyi
ACHR000824
N
0.605
ACOM023536
Anopheles coluzzii
ACOM023536
N
0.605
ACUA002517
Anopheles culicifacies
ACUA002517
N
0.605
ADIR010513
Anopheles dirus
ADIR010513
N
0.605
AEPI007457
Anopheles epiroticus
AEPI007457
N
0.605
AFAF004631
Anopheles farauti
AFAF004631
N
0.605
AFUN008276
Anopheles funestus
AFUN008276
N
0.605
AMAM007470
Anopheles maculatus
AMAM007470
N
0.605
AMEC010472
Anopheles melas
AMEC010472
N
0.605
AMEM015770
Anopheles merus
AMEM015770
N
0.605
AMIN003302
Anopheles minimus
AMIN003302
N
0.605
AQUA007127
Anopheles quadriannulatus
AQUA007127
N
0.605
ASIS021704
Anopheles sinensis
ASIS021704
N
0.605
ASTEI00336
Anopheles stephensi
ASTEI00336
N
0.605
D915_15883
Fasciola hepatica
D915_15883
N
0.604
T265_02983
Opisthorchis viverrini
T265_02983
N
0.604
BGIBMGA009228
Bombyx mori
BGIBMGA009228
N
0.603
SMU15005679
Schmidtea mediterranea
SMU15005679
N
0.602
ECANG7_05376
Echinococcus canadensis
ECANG7_05376
N
0.602
EmuJ_000113200
Echinococcus multilocularis
EmuJ_000113200
N
0.602
TASK_0000875901
Taenia asiatica
TASK_0000875901
N
0.602
TsM_000047400
Taenia solium
TsM_000047400
N
0.602
HMEL010720
Heliconius melpomene
HMEL010720
N
0.600
KGM_12870
Danaus plexippus
KGM_12870
N
0.600
TriadG53566
Trichoplax adhaerens
TriadG53566
N
0.594
dalao
Drosophila melanogaster
FBgn0030093
N
0.591
GG18291
Drosophila erecta
FBgn0110507
N
0.591
GM13722
Drosophila sechellia
FBgn0168653
N
0.591
GD16931
Drosophila simulans
FBgn0188511
N
0.591
GE15824
Drosophila yakuba
FBgn0233388
N
0.591
ENSPPYG00000012585
Pongo abelii
ENSPPYG00000012585
N
0.587
GF19131
Drosophila ananassae
FBgn0096142
N
0.584
GH12291
Drosophila grimshawi
FBgn0119770
N
0.584
GL26801
Drosophila persimilis
FBgn0164382
N
0.584
GK25765
Drosophila willistoni
FBgn0227724
N
0.584
GA26137
Drosophila pseudoobscura
FBgn0247513
N
0.584
MDOA009352
Musca domestica
MDOA009352
N
0.584
SMU15025606
Schmidtea mediterranea
SMU15025606
N
0.574
LotgiG111061
Lottia gigantea
LotgiG111061
N
0.572
ENSGGOG00000026277
Gorilla gorilla
ENSGGOG00000026277
N
0.562
D918_01415
Trichuris suis
D918_01415
N
0.560
TTRE_0000149701
Trichuris trichiura
TTRE_0000149701
N
0.560
TMUE_s0023006500
Trichuris muris
TMUE_s0023006500
N
0.554
GI15536
Drosophila mojavensis
FBgn0138285
N
0.547
GJ14880
Drosophila virilis
FBgn0202084
N
0.547
XP_002158206.1
Hydra magnipapillata
XP_002158206.1
N
0.543
csin103376
Clonorchis sinensis
csin103376
N
0.535
SSLN_0001888901
Schistocephalus solidus
SSLN_0001888901
N
0.532
EVEC_0000378901
Enterobius vermicularis
EVEC_0000378901
N
0.514
Aqu1.224100
Amphimedon queenslandica
Aqu1.224100
N
0.486
ASIM_0001578601
Anisakis simplex
ASIM_0001578601
N
0.474
ASIM_0001639001
Anisakis simplex
ASIM_0001639001
N
0.474
ANCCAN_03785
Ancylostoma caninum
ANCCAN_03785
N
0.470
ANCCAN_09575
Ancylostoma caninum
ANCCAN_09575
N
0.470
ANCCEY_02937
Ancylostoma ceylanicum
ANCCEY_02937
N
0.470
ANCDUO_12071
Ancylostoma duodenale
ANCDUO_12071
N
0.470
HCOI00022200
Haemonchus contortus
HCOI00022200
N
0.470
HCOI00569400
Haemonchus contortus
HCOI00569400
N
0.470
HPBE_0000083501
Heligmosomoides bakeri
HPBE_0000083501
N
0.470
HPLM_0001658301
Haemonchus placei
HPLM_0001658301
N
0.470
NECAME_16117
Necator americanus
NECAME_16117
N
0.470
OESDEN_12607
Oesophagostomum dentatum
OESDEN_12607
N
0.470
OESDEN_21929
Oesophagostomum dentatum
OESDEN_21929
N
0.470
SVUK_0000819801
Strongylus vulgaris
SVUK_0000819801
N
0.470
TELCIR_14354
Teladorsagia circumcincta
TELCIR_14354
N
0.470
ALUE_0000987201
Ascaris lumbricoides
ALUE_0000987201
N
0.468
ASU_02248
Ascaris suum
ASU_02248
N
0.468
DME_0000063901
Dracunculus medinensis
DME_0000063901
N
0.468
SMUV_0000644601
Syphacia muris
SMUV_0000644601
N
0.468
ACAC_0000207501
Angiostrongylus cantonensis
ACAC_0000207501
N
0.464
WUBG_07283
Wuchereria bancrofti
WUBG_07283
N
0.461
Bm7076
Brugia malayi
Bm7076
N
0.461
LOAG_01279
Loa loa
LOAG_01279
N
0.461
WBGene00245293
Onchocerca volvulus
WBGene00245293
N
0.461
EEL_0000522201
Elaeophora elaphi
EEL_0000522201
N
0.461
nAv.1.0.1.g03900
Acanthocheilonema viteae
nAv.1.0.1.g03900
N
0.461
nDi.2.2.2.g02092
Dirofilaria immitis
nDi.2.2.2.g02092
N
0.461
nLs.2.1.2.g01047
Litomosoides sigmodontis
nLs.2.1.2.g01047
N
0.461
nOo.2.0.1.g01360
Onchocerca ochengi
nOo.2.0.1.g01360
N
0.461
OFLC_0001285101
Onchocerca flexuosa
OFLC_0001285101
N
0.461
TCLT_0000145301
Thelazia callipaeda
TCLT_0000145301
N
0.461
MhA1_Contig1809.frz3.gene8
Meloidogyne hapla
MhA1_Contig1809.frz3.gene8
N
0.456
CLEC007658
Cimex lectularius
CLEC007658
N
0.448
Minc14081
Meloidogyne incognita
Minc14081
N
0.437
maker-nMf.1.1.scaf01126-augustus-gene-0.13
Meloidogyne floridensis
maker-nMf.1.1.scaf01126-augustus-gene-0.13
N
0.437
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2
N
0.437
ML45008a
Mnemiopsis leidyi
ML45008a
N
0.429
RSKR_0000347900
Rhabditophanes kr3021
RSKR_0000347900
N
0.423
L889_g3706
Steinernema feltiae
L889_g3706
N
0.422