CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L892_g11245
(
Steinernema scapterisci
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
L892_g11245
T336529_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L892_g11245.t1
Sox
1
28
MSEAQKQTFHNLAEQEKKLFEAEPKLFR
L892_g11245.t1
Sox
54
122
PKRVLHAFYFFTEAKRPEVRARFPHLGIGRISQELGRMWINLSEEESQIYWDMMEKDRERYKEEMRNYK
Links
Other
Sox
family TFs
Other
Steinernema scapterisci
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASTEI11547
Anopheles stephensi
ASTEI11547
N
0.447
CLEC007928
Cimex lectularius
CLEC007928
N
0.465
csin104030
Clonorchis sinensis
csin104030
N
0.428
ECPE_0001091201
Echinostoma caproni
ECPE_0001091201
N
0.428
ECPE_0001414101
Echinostoma caproni
ECPE_0001414101
N
0.447
GL15829
Drosophila persimilis
FBgn0153433
N
0.451
GPLIN_000727200
Globodera pallida
GPLIN_000727200
N
0.446
L596_g22130
Steinernema carpocapsae
L596_g22130
N
0.455
MDOA008389
Musca domestica
MDOA008389
N
0.428
TRE_0001071501
Trichobilharzia regenti
TRE_0001071501
N
0.441