TRE_0001071501 (Trichobilharzia regenti)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 TRE_0001071501 T337210_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
TRE_0001071501-mRNA-1 Sox 2 30
TRE_0001071501-mRNA-1 Sox 50 116

Links

Other Sox family TFs
Other Trichobilharzia regenti TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
csin104030 Clonorchis sinensis csin104030 N 0.679
ECPE_0001091201 Echinostoma caproni ECPE_0001091201 N 0.679
ECPE_0001414101 Echinostoma caproni ECPE_0001414101 N 0.583
GPLIN_000727200 Globodera pallida GPLIN_000727200 N 0.583
Ocbimv22036873m.g Octopus bimaculoides Ocbimv22036873m.g N 0.557
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.554
GL15829 Drosophila persimilis FBgn0153433 N 0.543
ASTEI11547 Anopheles stephensi ASTEI11547 N 0.543
MDOA008389 Musca domestica MDOA008389 N 0.535
MESCA001453 Megaselia scalaris MESCA001453 N 0.523
ENSETEG00000016379 Echinops telfairi ENSETEG00000016379 N 0.508
ENSTGUG00000006267 Taeniopygia guttata ENSTGUG00000006267 N 0.506
Gfo_R010508 Geospiza fortis Gfo_R010508 N 0.506
HMGB1 Tupaia belangeri ENSTBEG00000013046 N 0.489
CLEC007928 Cimex lectularius CLEC007928 N 0.486
HMGB2 Ornithorhynchus anatinus ENSOANG00000029120 N 0.479
ENSDNOG00000046638 Dasypus novemcinctus ENSDNOG00000046638 N 0.465
L892_g11245 Steinernema scapterisci L892_g11245 N 0.441
ENSDNOG00000034905 Dasypus novemcinctus ENSDNOG00000034905 N 0.435
A_07022 Schistosoma haematobium A_07022 N 0.418