Gfo_R010508 (Geospiza fortis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Gfo_R010508 T333744_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R010508 Sox 1 30
Gfo_R010508 Sox 46 114

Links

Other Sox family TFs
Other Geospiza fortis TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSTGUG00000006267 Taeniopygia guttata ENSTGUG00000006267 N 0.739
ENSETEG00000016379 Echinops telfairi ENSETEG00000016379 N 0.688
HMGB2 Ornithorhynchus anatinus ENSOANG00000029120 N 0.678
HMGB1 Tupaia belangeri ENSTBEG00000013046 N 0.669
ENSAMEG00000008824 Ailuropoda melanoleuca ENSAMEG00000008824 N 0.568
Alligator_sinensis_CCG007907.1 Alligator sinensis Alligator_sinensis_CCG007907.1 N 0.565
ENSBTAG00000020685 Bos taurus ENSBTAG00000020685 N 0.563
ENSDNOG00000034905 Dasypus novemcinctus ENSDNOG00000034905 N 0.556
ENSOARG00000005357 Ovis aries ENSOARG00000005357 N 0.549
ECPE_0001091201 Echinostoma caproni ECPE_0001091201 N 0.549
csin104030 Clonorchis sinensis csin104030 N 0.536
GL15829 Drosophila persimilis FBgn0153433 N 0.531
ASTEI11547 Anopheles stephensi ASTEI11547 N 0.531
GPLIN_000727200 Globodera pallida GPLIN_000727200 N 0.527
MDOA008389 Musca domestica MDOA008389 N 0.525
Ocbimv22036873m.g Octopus bimaculoides Ocbimv22036873m.g N 0.521
ENSDNOG00000046638 Dasypus novemcinctus ENSDNOG00000046638 N 0.519
MESCA001453 Megaselia scalaris MESCA001453 N 0.515
CLEC007928 Cimex lectularius CLEC007928 N 0.515
ENSOGAG00000033550 Otolemur garnettii ENSOGAG00000033550 N 0.513
TRE_0001071501 Trichobilharzia regenti TRE_0001071501 N 0.506
ECPE_0001414101 Echinostoma caproni ECPE_0001414101 N 0.504
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.499
ENSMMUG00000018606 Macaca mulatta ENSMMUG00000018606 N 0.493
Tal_R010719 Tyto alba Tal_R010719 N 0.471
AABR07040430.1 Rattus norvegicus ENSRNOG00000056486 N 0.468
ENSMMUG00000013266 Macaca mulatta ENSMMUG00000013266 N 0.461
ENSMMUP00000017448 Macaca fascicularis ENSMMUP00000017448 N 0.461
ENSPTRG00000013662 Pan troglodytes ENSPTRG00000013662 N 0.453
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.445
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.445
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.445
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.445
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.445
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.445
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.445
hmgb2b Takifugu rubripes ENSTRUG00000005015 N 0.441
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.438
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.438
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.438
ENSOARG00000005773 Ovis aries ENSOARG00000005773 N 0.437
ENSCJAG00000033913 Callithrix jacchus ENSCJAG00000033913 N 0.435
ENSOCUG00000022718 Oryctolagus cuniculus ENSOCUG00000022718 N 0.434
ENSOCUG00000024061 Oryctolagus cuniculus ENSOCUG00000024061 N 0.434
ENSTBEG00000016092 Tupaia belangeri ENSTBEG00000016092 N 0.434
ENSOCUG00000016030 Oryctolagus cuniculus ENSOCUG00000016030 N 0.431
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N 0.428
ENSOCUG00000022728 Oryctolagus cuniculus ENSOCUG00000022728 N 0.424
ENSBTAP00000049357-D1 Bos grunniens ENSBTAP00000049357-D1 N 0.424
ENSPANG00000011772 Papio anubis ENSPANG00000011772 N 0.422