CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTRK_0000112100
(
Parastrongyloides trichosuri
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
PTRK_0000112100
T336814_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0000112100.1
Sox
903
966
EKATKAAVLYCNINFPNLITDHPKWCDRSKQIHRLWRALDQETRQHWVVKARENRTKLAKPRAT
Links
Other
Sox
family TFs
Other
Parastrongyloides trichosuri
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O9_07304
Exophiala aquamarina
A1O9_07304
N
CCM_08920
Cordyceps militaris
CCM_08920
N
e_gw1.26.269.1
Nectria haematococca
e_gw1.26.269.1
N
fgenesh1_pg.00168_#_97
Aspergillus carbonarius
fgenesh1_pg.00168_#_97
N
fgenesh1_pg.C_scaffold_3001208
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_3001208
N
GLRG_09059
Colletotrichum graminicola
GLRG_09059
N
H072_10795
Dactylellina haptotyla
H072_10795
N
NechaG34482
Fusarium solani
NechaG34482
N
S40285_07144
Stachybotrys chlorohalonata
S40285_07144
N
S40288_02283
Stachybotrys chartarum
S40288_02283
N
TRIATDRAFT_173242
Trichoderma atroviride
TRIATDRAFT_173242
N
TRIVIDRAFT_203624
Trichoderma virens
TRIVIDRAFT_203624
N
UREG_03093
Uncinocarpus reesii
UREG_03093
N