CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PTRK_0000112100
(
Parastrongyloides trichosuri
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
PTRK_0000112100
T336814_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0000112100.1
Sox
903
966
EKATKAAVLYCNINFPNLITDHPKWCDRSKQIHRLWRALDQETRQHWVVKARENRTKLAKPRAT
Links
Other
Sox
family TFs
Other
Parastrongyloides trichosuri
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPAL_0001071100
Strongyloides papillosus
SPAL_0001071100
N
0.696
SSTP_0000750300
Strongyloides stercoralis
SSTP_0000750300
N
0.696
SVE_1649600
Strongyloides venezuelensis
SVE_1649600
N
0.696
RSKR_0000923100
Rhabditophanes kr3021
RSKR_0000923100
N
0.440
EVEC_0000369701
Enterobius vermicularis
EVEC_0000369701
N
0.428