RSKR_0000605700 (Rhabditophanes kr3021)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 RSKR_0000605700 T336866_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000605700.1 Sox 9 78
RSKR_0000605700.1 Sox 96 164

Links

Other Sox family TFs
Other Rhabditophanes kr3021 TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009776 Calypte anna Aan_R009776 I
Aan_R014924 Calypte anna Aan_R014924 I
Afo_R010364 Aptenodytes forsteri Afo_R010364 I
Afo_R014904 Aptenodytes forsteri Afo_R014904 I
Alligator_sinensis_CCG001232.1 Alligator sinensis Alligator_sinensis_CCG001232.1 I
Alligator_sinensis_CCG012608.1 Alligator sinensis Alligator_sinensis_CCG012608.1 I
Brh_R005747 Buceros rhinoceros Brh_R005747 I
Brh_R006445 Buceros rhinoceros Brh_R006445 I
Cflo_09641--XP_393231.3_APIME Camponotus floridanus Cflo_09641--XP_393231.3_APIME I
Cmyd_10011933 Chelonia mydas Cmyd_10011933 I
MYB Anolis carolinensis ENSACAG00000009861 I
MYBL1 Anolis carolinensis ENSACAG00000016577 I
ENSAMEG00000009813 Ailuropoda melanoleuca ENSAMEG00000009813 I
ENSAMEG00000012401 Ailuropoda melanoleuca ENSAMEG00000012401 I
ENSAMXG00000004244 Astyanax mexicanus ENSAMXG00000004244 I
ENSAMXG00000013759 Astyanax mexicanus ENSAMXG00000013759 I
ENSAPLG00000007728 Anas platyrhynchos ENSAPLG00000007728 I
ENSAPLG00000014596 Anas platyrhynchos ENSAPLG00000014596 I
MYBL1 Bos taurus ENSBTAG00000011981 I
MYB Bos taurus ENSBTAG00000012074 I
MYB Canis familiaris ENSCAFG00000000230 I
MYBL1 Canis familiaris ENSCAFG00000007344 I
MYB Choloepus hoffmanni ENSCHOG00000010472 I
MYBL1 Choloepus hoffmanni ENSCHOG00000012311 I
ENSCING00000018880 Ciona intestinalis ENSCING00000018880 I
MYBL1 Callithrix jacchus ENSCJAG00000004466 I
MYB Callithrix jacchus ENSCJAG00000007798 I
MYBL1 Cavia porcellus ENSCPOG00000007578 I
MYB Cavia porcellus ENSCPOG00000014607 I
ENSCSAG00000014195 Chlorocebus sabaeus ENSCSAG00000014195 I
ENSCSAG00000016815 Chlorocebus sabaeus ENSCSAG00000016815 I
mybl1 Danio rerio ENSDARG00000030999 I
mybl2b Danio rerio ENSDARG00000032264 I
myb Danio rerio ENSDARG00000053666 I
MYBL1 Dasypus novemcinctus ENSDNOG00000016860 I
MYB Dasypus novemcinctus ENSDNOG00000047370 I
MYB Equus caballus ENSECAG00000009918 I
MYBL1 Equus caballus ENSECAG00000015959 I
MYB Erinaceus europaeus ENSEEUG00000001468 I
MYBL1 Echinops telfairi ENSETEG00000009840 I
ENSFALG00000005444 Ficedula albicollis ENSFALG00000005444 I
ENSFALG00000011914 Ficedula albicollis ENSFALG00000011914 I
MYB Felis catus ENSFCAG00000001812 I
MYBL1 Felis catus ENSFCAG00000031398 I
MYB Homo sapiens ENSG00000118513 D
MYBL1 Homo sapiens ENSG00000185697 D
mybl1 Gasterosteus aculeatus ENSGACG00000002964 I
myb Gasterosteus aculeatus ENSGACG00000011054 I
MYB Gallus gallus ENSGALG00000013956 I
ENSGALG00000015522 Gallus gallus ENSGALG00000015522 I
MYB Gorilla gorilla ENSGGOG00000001379 I
MYBL1 Gorilla gorilla ENSGGOG00000003892 I
ENSGMOG00000011856 Gadus morhua ENSGMOG00000011856 I
ENSGMOG00000017106 Gadus morhua ENSGMOG00000017106 I
ENSLACG00000002813 Latimeria chalumnae ENSLACG00000002813 I
ENSLACG00000011097 Latimeria chalumnae ENSLACG00000011097 I
ENSLACG00000018995 Latimeria chalumnae ENSLACG00000018995 I
MYBL1 Loxodonta africana ENSLAFG00000004821 I
MYB Loxodonta africana ENSLAFG00000018350 I
ENSLOCG00000001337 Lepisosteus oculatus ENSLOCG00000001337 I
ENSLOCG00000004709 Lepisosteus oculatus ENSLOCG00000004709 I
ENSLOCG00000016218 Lepisosteus oculatus ENSLOCG00000016218 I
ENSMEUG00000010838 Macropus eugenii ENSMEUG00000010838 I
MYB Meleagris gallopavo ENSMGAG00000013053 I
MYB Microcebus murinus ENSMICG00000005531 I
MYBL1 Microcebus murinus ENSMICG00000009881 I
MYB Myotis lucifugus ENSMLUG00000002125 I
MYBL1 Myotis lucifugus ENSMLUG00000003166 I
MYBL1 Macaca mulatta ENSMMUG00000013974 I
MYB Macaca mulatta ENSMMUG00000018166 I
MYBL1 Monodelphis domestica ENSMODG00000007964 I
MYB Monodelphis domestica ENSMODG00000017488 I
ENSMPUG00000014814 Mustela putorius furo ENSMPUG00000014814 I
Myb Mus musculus ENSMUSG00000019982 D
Mybl1 Mus musculus ENSMUSG00000025912 D
ENSNLEG00000014751 Nomascus leucogenys ENSNLEG00000014751 I
MYBL1 Ornithorhynchus anatinus ENSOANG00000002308 I
MYB Ornithorhynchus anatinus ENSOANG00000002777 I
ENSOARG00000014901 Ovis aries ENSOARG00000014901 I
ENSOARG00000017663 Ovis aries ENSOARG00000017663 I
MYB Oryctolagus cuniculus ENSOCUG00000011633 I
MYBL1 Oryctolagus cuniculus ENSOCUG00000015184 I
MYB Otolemur garnettii ENSOGAG00000000056 I
MYBL1 Otolemur garnettii ENSOGAG00000004344 I
ENSONIG00000000469 Oreochromis niloticus ENSONIG00000000469 I
ENSONIG00000014188 Oreochromis niloticus ENSONIG00000014188 I
MYB Ochotona princeps ENSOPRG00000013639 I
mybl1 Oryzias latipes ENSORLG00000008488 I
myb Oryzias latipes ENSORLG00000016573 I
ENSP00000339992 Macaca fascicularis ENSP00000339992 I
ENSP00000339992-D1 Bos grunniens ENSP00000339992-D1 I
ENSP00000385360 Macaca fascicularis ENSP00000385360 I
ENSPANG00000008051 Papio anubis ENSPANG00000008051 I
ENSPANG00000018932 Papio anubis ENSPANG00000018932 I
MYB Procavia capensis ENSPCAG00000009197 I
MYBL1 Procavia capensis ENSPCAG00000009301 I
ENSPFOG00000005169 Poecilia formosa ENSPFOG00000005169 I
ENSPFOG00000011241 Poecilia formosa ENSPFOG00000011241 I
ENSPMAG00000000117 Petromyzon marinus ENSPMAG00000000117 I
ENSPMAG00000001639 Petromyzon marinus ENSPMAG00000001639 I
ENSPPYG00000017028 Pongo abelii ENSPPYG00000017028 I
ENSPPYG00000018640 Pongo abelii ENSPPYG00000018640 I
ENSPSIG00000011892 Pelodiscus sinensis ENSPSIG00000011892 I
ENSPSIG00000011935 Pelodiscus sinensis ENSPSIG00000011935 I
MYB Pan troglodytes ENSPTRG00000018631 I
MYBL1 Pan troglodytes ENSPTRG00000020308 I
MYB Pteropus vampyrus ENSPVAG00000007652 I
Mybl1 Rattus norvegicus ENSRNOG00000021669 I
Myb Rattus norvegicus ENSRNOG00000055858 I
MYB Sorex araneus ENSSARG00000002855 I
MYBL1 Sorex araneus ENSSARG00000006938 I
ENSSHAG00000010559 Sarcophilus harrisii ENSSHAG00000010559 I
ENSSHAG00000014728 Sarcophilus harrisii ENSSHAG00000014728 I
MYB Sus scrofa ENSSSCG00000004167 I
ENSSTOG00000006634 Ictidomys tridecemlineatus ENSSTOG00000006634 I
ENSSTOG00000007581 Ictidomys tridecemlineatus ENSSTOG00000007581 I
MYB Tupaia belangeri ENSTBEG00000016454 I
MYBL1 Taeniopygia guttata ENSTGUG00000011289 I
MYB Taeniopygia guttata ENSTGUG00000011495 I
mybl1 Tetraodon nigroviridis ENSTNIG00000010104 I
myb Tetraodon nigroviridis ENSTNIG00000016319 I
mybl1 Takifugu rubripes ENSTRUG00000008816 I
myb Takifugu rubripes ENSTRUG00000016069 I
ENSTSYG00000014301 Tarsius syrichta ENSTSYG00000014301 I
MYB Tursiops truncatus ENSTTRG00000003718 I
MYBL1 Tursiops truncatus ENSTTRG00000017138 I
MYBL1 Vicugna pacos ENSVPAG00000004194 I
ENSXMAG00000001658 Xiphophorus maculatus ENSXMAG00000001658 I
ENSXMAG00000004392 Xiphophorus maculatus ENSXMAG00000004392 I
estExt_fgenesh2_pg.C_1220082 Branchiostoma floridae estExt_fgenesh2_pg.C_1220082 I
estExt_fgenesh2_pg.C_1220090 Branchiostoma floridae estExt_fgenesh2_pg.C_1220090 I
Gfo_R002003 Geospiza fortis Gfo_R002003 I
Gfo_R006432 Geospiza fortis Gfo_R006432 I
MYB_AVIMB Avian myeloblastosis virus MYB_AVIMB D
Myotis_brandtii_MYBL1_10031628 Myotis brandtii Myotis_brandtii_MYBL1_10031628 I
Myotis_brandtii_MYB_10035701 Myotis brandtii Myotis_brandtii_MYB_10035701 I
NEMVEDRAFT_v1g38726 Nematostella vectensis NEMVEDRAFT_v1g38726 I
Ogr00471 Ophisaurus gracilis Ogr00471 I
Ogr08782 Ophisaurus gracilis Ogr08782 I
Pvit_15001 Pogona vitticeps Pvit_15001 I
Pvit_17294 Pogona vitticeps Pvit_17294 I
Sakowv30034766m.g Saccoglossus kowalevskii Sakowv30034766m.g I
SMAR001262 Strigamia maritima SMAR001262 I
SPU_000861 Strongylocentrotus purpuratus SPU_000861 N
Tal_R003498 Tyto alba Tal_R003498 I
Tal_R007653 Tyto alba Tal_R007653 I
myb Xenopus tropicalis XB-GENE-867553 I
myb.S Xenopus laevis XB-GENE-867566 I
mybl1 Xenopus tropicalis XB-GENE-986560 I
mybl1.L Xenopus laevis XB-GENE-986561 I
XP_002935855 Xenopus tropicalis XP_002935855 I