RSKR_0000605700 (Rhabditophanes kr3021)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 RSKR_0000605700 T336866_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000605700.1 Sox 9 78
RSKR_0000605700.1 Sox 96 164

Links

Other Sox family TFs
Other Rhabditophanes kr3021 TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SSTP_0000371800 Strongyloides stercoralis SSTP_0000371800 N 0.678
PTRK_0000986200 Parastrongyloides trichosuri PTRK_0000986200 N 0.678
SVE_0494300 Strongyloides venezuelensis SVE_0494300 N 0.678
SPAL_0001030300 Strongyloides papillosus SPAL_0001030300 N 0.678
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.665
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.652
L892_g17551 Steinernema scapterisci L892_g17551 N 0.652
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.652
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.652
ASU_03902 Ascaris suum ASU_03902 N 0.652
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.652
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.652
L893_g5947 Steinernema glaseri L893_g5947 N 0.652
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.649
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.649
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.649
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.649
Bm4180 Brugia malayi Bm4180 N 0.649
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.649
LOAG_04936 Loa loa LOAG_04936 N 0.649
L889_g13533 Steinernema feltiae L889_g13533 N 0.647
WUBG_12099 Wuchereria bancrofti WUBG_12099 N 0.643
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.641
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N 0.640
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N 0.640
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.637
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.637
D918_07195 Trichuris suis D918_07195 N 0.636
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.636
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.633
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.633
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.633
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.633
NECAME_09126 Necator americanus NECAME_09126 N 0.633
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.631
ASIM_0000048401 Anisakis simplex ASIM_0000048401 N 0.621
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N 0.620
D917_08189 Trichinella nativa D917_08189 N 0.611
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N 0.611
ANCCEY_10333 Ancylostoma ceylanicum ANCCEY_10333 N 0.608
nLs.2.1.2.g00300 Litomosoides sigmodontis nLs.2.1.2.g00300 N 0.606
BXY_1555400 Bursaphelenchus xylophilus BXY_1555400 N 0.603
CJA09678 Caenorhabditis japonica CJA09678 N 0.601
CBN17977 Caenorhabditis brenneri CBN17977 N 0.600
CBG17468 Caenorhabditis briggsae CBG17468 N 0.598
D917_01254 Trichinella nativa D917_01254 N 0.595
EFV57410 Trichinella spiralis EFV57410 N 0.595
hmg-1.2 Caenorhabditis elegans WBGene00001972 N 0.594
EFV53345 Trichinella spiralis EFV53345 N 0.592
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N 0.585
CJA42049 Caenorhabditis japonica CJA42049 N 0.570
MhA1_Contig113.frz3.gene9 Meloidogyne hapla MhA1_Contig113.frz3.gene9 N 0.570
Minc03268 Meloidogyne incognita Minc03268 N 0.570
Minc08988 Meloidogyne incognita Minc08988 N 0.570
CRE02943 Caenorhabditis remanei CRE02943 N 0.568
ACAC_0001052301 Angiostrongylus cantonensis ACAC_0001052301 N 0.551
GPUH_0001544201 Gongylonema pulchrum GPUH_0001544201 N 0.544
Minc01077 Meloidogyne incognita Minc01077 N 0.522
TELCIR_06008 Teladorsagia circumcincta TELCIR_06008 N 0.501
BXY_1714600 Bursaphelenchus xylophilus BXY_1714600 N 0.485
CGI_10023724 Crassostrea gigas CGI_10023724 N 0.479
TsM_000115400 Taenia solium TsM_000115400 N 0.477
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.477
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.477
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.468
CapteG158220 Capitella teleta CapteG158220 N 0.466
T265_12733 Opisthorchis viverrini T265_12733 N 0.458
D915_00818 Fasciola hepatica D915_00818 N 0.456
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.456
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.456
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.456
HelroG157878 Helobdella robusta HelroG157878 N 0.451
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.449
Smp_000980 Schistosoma mansoni Smp_000980 N 0.449
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.449
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.449
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.443
AAI68534 Xenopus tropicalis AAI68534 N 0.441
ENSAMXG00000014031 Astyanax mexicanus ENSAMXG00000014031 N 0.439
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.436
YQE_03203 Dendroctonus ponderosae YQE_03203 N 0.436
ISCW017350 Ixodes scapularis ISCW017350 N 0.435
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.432
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.432
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.432
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.431
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.431
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.431
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.430
PHUM006290 Pediculus humanus PHUM006290 N 0.429
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.429
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.428
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.428
SMAR013695 Strigamia maritima SMAR013695 N 0.428
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.428
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.426
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.426
NV15664 Nasonia vitripennis NV15664 N 0.423
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.422
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.422
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.422
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.422
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.422
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.422
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.420
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.420
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.420
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.417
HelroG157726 Helobdella robusta HelroG157726 N 0.416
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N 0.415
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N 0.415
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.415