CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D918_07195
(
Trichuris suis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
D918_07195
T336193_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D918_07195
Sox
8
81
PRGKTSPYGFFVKMCYEEHKKKYPSENVQVTEISKKCSEKWKARDTMTQQEKQRFYELAQKDRERYQAEVAAYG
D918_07195
Sox
99
167
PKRALSAFFFFSHVKRPDVQQGHPEWKVGQVAQELGRMWKELDEEQKREYEDMAVKDKVRYEQEMKEYK
Links
Other
Sox
family TFs
Other
Trichuris suis
TFs
187 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TTRE_0000338301
Trichuris trichiura
TTRE_0000338301
N
0.737
TMUE_s0235000800
Trichuris muris
TMUE_s0235000800
N
0.726
ACOC_0000768601
Angiostrongylus costaricensis
ACOC_0000768601
N
0.687
HCOI00860100
Haemonchus contortus
HCOI00860100
N
0.687
NBR_0000911001
Nippostrongylus brasiliensis
NBR_0000911001
N
0.687
NECAME_09126
Necator americanus
NECAME_09126
N
0.687
TELCIR_07111
Teladorsagia circumcincta
TELCIR_07111
N
0.687
D917_08189
Trichinella nativa
D917_08189
N
0.686
Hba_13817
Heterorhabditis bacteriophora
Hba_13817
N
0.685
PTRK_0000986200
Parastrongyloides trichosuri
PTRK_0000986200
N
0.684
SPAL_0001030300
Strongyloides papillosus
SPAL_0001030300
N
0.684
SSTP_0000371800
Strongyloides stercoralis
SSTP_0000371800
N
0.684
SVE_0494300
Strongyloides venezuelensis
SVE_0494300
N
0.684
SBAD_0000405201
Soboliphyme baturini
SBAD_0000405201
N
0.681
Bm4180
Brugia malayi
Bm4180
N
0.668
LOAG_04936
Loa loa
LOAG_04936
N
0.668
WBGene00245261
Onchocerca volvulus
WBGene00245261
N
0.668
ASU_03902
Ascaris suum
ASU_03902
N
0.668
EEL_0000068601
Elaeophora elaphi
EEL_0000068601
N
0.668
EVEC_0000577301
Enterobius vermicularis
EVEC_0000577301
N
0.668
nAv.1.0.1.g02101
Acanthocheilonema viteae
nAv.1.0.1.g02101
N
0.668
nDi.2.2.2.g04979
Dirofilaria immitis
nDi.2.2.2.g04979
N
0.668
PEQ_0000150901
Parascaris equorum
PEQ_0000150901
N
0.668
SMUV_0000232601
Syphacia muris
SMUV_0000232601
N
0.668
TCLT_0000879501
Thelazia callipaeda
TCLT_0000879501
N
0.668
TCNE_0000567001
Toxocara canis
TCNE_0000567001
N
0.668
L596_g22130
Steinernema carpocapsae
L596_g22130
N
0.667
L892_g17551
Steinernema scapterisci
L892_g17551
N
0.667
L893_g5947
Steinernema glaseri
L893_g5947
N
0.665
ANCCAN_10156
Ancylostoma caninum
ANCCAN_10156
N
0.663
DME_0001055201
Dracunculus medinensis
DME_0001055201
N
0.663
L889_g13533
Steinernema feltiae
L889_g13533
N
0.662
hmg-1.2
Caenorhabditis elegans
WBGene00001972
N
0.661
CBG17468
Caenorhabditis briggsae
CBG17468
N
0.659
CBN17977
Caenorhabditis brenneri
CBN17977
N
0.659
CJA09678
Caenorhabditis japonica
CJA09678
N
0.659
Ppa-hmg-1.2
Pristionchus pacificus
PPA02361
N
0.656
scaffold580-EXSNAP2012.5
Pristionchus exspectatus
scaffold580-EXSNAP2012.5
N
0.656
EFV57410
Trichinella spiralis
EFV57410
N
0.653
D917_01254
Trichinella nativa
D917_01254
N
0.653
nRc.2.0.1.g43473
Romanomermis culicivorax
nRc.2.0.1.g43473
N
0.642
RSKR_0000605700
Rhabditophanes kr3021
RSKR_0000605700
N
0.636
EFV53345
Trichinella spiralis
EFV53345
N
0.634
ASIM_0000048401
Anisakis simplex
ASIM_0000048401
N
0.634
WUBG_12099
Wuchereria bancrofti
WUBG_12099
N
0.630
CJA42049
Caenorhabditis japonica
CJA42049
N
0.628
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2
N
0.626
genemark-nMf.1.1.scaf06964-processed-gene-0.3
Meloidogyne floridensis
genemark-nMf.1.1.scaf06964-processed-gene-0.3
N
0.626
ANCCEY_10333
Ancylostoma ceylanicum
ANCCEY_10333
N
0.615
CRE02943
Caenorhabditis remanei
CRE02943
N
0.613
ACAC_0001052301
Angiostrongylus cantonensis
ACAC_0001052301
N
0.605
nLs.2.1.2.g00300
Litomosoides sigmodontis
nLs.2.1.2.g00300
N
0.601
BXY_1555400
Bursaphelenchus xylophilus
BXY_1555400
N
0.568
GPUH_0001544201
Gongylonema pulchrum
GPUH_0001544201
N
0.557
MhA1_Contig113.frz3.gene9
Meloidogyne hapla
MhA1_Contig113.frz3.gene9
N
0.557
TELCIR_06008
Teladorsagia circumcincta
TELCIR_06008
N
0.555
Minc03268
Meloidogyne incognita
Minc03268
N
0.553
Minc08988
Meloidogyne incognita
Minc08988
N
0.553
Minc01077
Meloidogyne incognita
Minc01077
N
0.505
ISCW017350
Ixodes scapularis
ISCW017350
N
0.497
CapteG158220
Capitella teleta
CapteG158220
N
0.496
Sakowv30042012m.g
Saccoglossus kowalevskii
Sakowv30042012m.g
N
0.495
tetur02g08260
Tetranychus urticae
tetur02g08260
N
0.487
tetur02g08340
Tetranychus urticae
tetur02g08340
N
0.484
SMAR013695
Strigamia maritima
SMAR013695
N
0.482
EmuJ_001049000
Echinococcus multilocularis
EmuJ_001049000
N
0.480
MCOS_0000526101
Mesocestoides corti
MCOS_0000526101
N
0.480
TsM_000115400
Taenia solium
TsM_000115400
N
0.480
ACYPI007949
Acyrthosiphon pisum
ACYPI007949
N
0.479
HelroG157878
Helobdella robusta
HelroG157878
N
0.475
fgenesh2_pm.scaffold_24000033
Branchiostoma floridae
fgenesh2_pm.scaffold_24000033
N
0.473
NV15664
Nasonia vitripennis
NV15664
N
0.464
DAPPUDRAFT_232871
Daphnia pulex
DAPPUDRAFT_232871
N
0.463
CGI_10023724
Crassostrea gigas
CGI_10023724
N
0.461
T265_12733
Opisthorchis viverrini
T265_12733
N
0.461
D915_00818
Fasciola hepatica
D915_00818
N
0.460
ECANG7_02036
Echinococcus canadensis
ECANG7_02036
N
0.460
TTAC_0000225801
Hydatigera taeniaeformis
TTAC_0000225801
N
0.460
AAEL011380
Aedes aegypti
AAEL011380
N
0.457
ADAC001494
Anopheles darlingi
ADAC001494
N
0.457
AGAP000005
Anopheles gambiae
AGAP000005
N
0.457
AALB006743
Anopheles albimanus
AALB006743
N
0.457
AARA010318
Anopheles arabiensis
AARA010318
N
0.457
AATE018776
Anopheles atroparvus
AATE018776
N
0.457
ACUA021022
Anopheles culicifacies
ACUA021022
N
0.457
ADIR011701
Anopheles dirus
ADIR011701
N
0.457
AEPI002924
Anopheles epiroticus
AEPI002924
N
0.457
AFAF003948
Anopheles farauti
AFAF003948
N
0.457
AFUN010134
Anopheles funestus
AFUN010134
N
0.457
AMAM015540
Anopheles maculatus
AMAM015540
N
0.457
AMEC021909
Anopheles melas
AMEC021909
N
0.457
AMEM017336
Anopheles merus
AMEM017336
N
0.457
AMIN005344
Anopheles minimus
AMIN005344
N
0.457
ASIS000124
Anopheles sinensis
ASIS000124
N
0.457
PXEA_0000566701
Protopolystoma xenopodis
PXEA_0000566701
N
0.456
Cflo_05895--XP_001121384.1_APIME
Camponotus floridanus
Cflo_05895--XP_001121384.1_APIME
N
0.454
Hsal_13110--XP_001121384.1_APIME
Harpegnathos saltator
Hsal_13110--XP_001121384.1_APIME
N
0.454
CpipJ_CPIJ014043
Culex pipiens
CpipJ_CPIJ014043
N
0.453
CPIJ014043
Culex quinquefasciatus
CPIJ014043
N
0.453
HelroG157726
Helobdella robusta
HelroG157726
N
0.453
Smp_000980
Schistosoma mansoni
Smp_000980
N
0.452
PXEA_0002175501
Protopolystoma xenopodis
PXEA_0002175501
N
0.452
SCUD_0000020101
Schistosoma curassoni
SCUD_0000020101
N
0.452
SMTD_0001194601
Schistosoma mattheei
SMTD_0001194601
N
0.452
SROB_0000153901
Schistosoma rodhaini
SROB_0000153901
N
0.452
ACEP16613
Atta cephalotes
ACEP16613
N
0.450
SINV22586
Solenopsis invicta
SINV22586
N
0.450
HDID_0000237901
Hymenolepis diminuta
HDID_0000237901
N
0.448
HmN_000466000
Hymenolepis microstoma
HmN_000466000
N
0.448
HNAJ_0001249801
Hymenolepis nana
HNAJ_0001249801
N
0.448
Aqu1.227714
Amphimedon queenslandica
Aqu1.227714
N
0.446
PHUM006290
Pediculus humanus
PHUM006290
N
0.444
ENSBTAG00000031711
Bos taurus
ENSBTAG00000031711
N
0.442
ENSCJAG00000014214
Callithrix jacchus
ENSCJAG00000014214
N
0.442
ENSCJAG00000033322
Callithrix jacchus
ENSCJAG00000033322
N
0.442
ENSCSAG00000013078
Chlorocebus sabaeus
ENSCSAG00000013078
N
0.442
ENSMPUG00000018359
Mustela putorius furo
ENSMPUG00000018359
N
0.442
HMGB3
Oryctolagus cuniculus
ENSOCUG00000024959
N
0.442
LOC688583
Rattus norvegicus
ENSRNOG00000050910
N
0.442
ENSSSCG00000020770
Sus scrofa
ENSSSCG00000020770
N
0.442
ENSSSCG00000024283
Sus scrofa
ENSSSCG00000024283
N
0.442
ENSSTOG00000012404
Ictidomys tridecemlineatus
ENSSTOG00000012404
N
0.442
Dsp1
Drosophila melanogaster
FBgn0011764
N
0.442
GA11488
Drosophila pseudoobscura
FBgn0071539
N
0.442
GF19115
Drosophila ananassae
FBgn0096126
N
0.442
GG17955
Drosophila erecta
FBgn0110175
N
0.442
GD17278
Drosophila simulans
FBgn0188840
N
0.442
GE17263
Drosophila yakuba
FBgn0234741
N
0.442
LotgiG200052
Lottia gigantea
LotgiG200052
N
0.442
hmgb1a
Takifugu rubripes
ENSTRUG00000008452
N
0.440
DAPPUDRAFT_306496
Daphnia pulex
DAPPUDRAFT_306496
N
0.439
SMU15027649
Schmidtea mediterranea
SMU15027649
N
0.439
D915_15256
Fasciola hepatica
D915_15256
N
0.439
GH12282
Drosophila grimshawi
FBgn0119761
N
0.438
GI10980
Drosophila mojavensis
FBgn0133743
N
0.438
GJ19445
Drosophila virilis
FBgn0206588
N
0.438
GK25058
Drosophila willistoni
FBgn0227017
N
0.438
SPU_005572
Strongylocentrotus purpuratus
SPU_005572
N
0.438
HMEL007340
Heliconius melpomene
HMEL007340
N
0.437
SMU15030256
Schmidtea mediterranea
SMU15030256
N
0.437
csin110255
Clonorchis sinensis
csin110255
N
0.436
DILT_0001497901
Diphyllobothrium latum
DILT_0001497901
N
0.436
SSLN_0000493501
Schistocephalus solidus
SSLN_0000493501
N
0.436
T265_14643
Opisthorchis viverrini
T265_14643
N
0.436
LCUP007363
Lucilia cuprina
LCUP007363
N
0.435
MDOA008812
Musca domestica
MDOA008812
N
0.435
ENSOCUG00000021132
Oryctolagus cuniculus
ENSOCUG00000021132
N
0.433
HelroG87827
Helobdella robusta
HelroG87827
N
0.433
Sjc_0031360
Schistosoma japonicum
Sjc_0031360
N
0.433
BXY_1714600
Bursaphelenchus xylophilus
BXY_1714600
N
0.432
SSLN_0001302101
Schistocephalus solidus
SSLN_0001302101
N
0.432
ENSCJAG00000007419
Callithrix jacchus
ENSCJAG00000007419
N
0.429
AQUA004962
Anopheles quadriannulatus
AQUA004962
N
0.429
ENSCJAG00000022832
Callithrix jacchus
ENSCJAG00000022832
N
0.428
ENSDNOG00000005537
Dasypus novemcinctus
ENSDNOG00000005537
N
0.428
ENSOCUG00000004133
Oryctolagus cuniculus
ENSOCUG00000004133
N
0.426
LDEC006842
Leptinotarsa decemlineata
LDEC006842
N
0.426
Hmgb2l1
Rattus norvegicus
ENSRNOG00000013167
N
0.425
RGD1561694
Rattus norvegicus
ENSRNOG00000029107
N
0.425
Hmgb2
Rattus norvegicus
ENSRNOG00000033321
N
0.425
PXEA_0000637001
Protopolystoma xenopodis
PXEA_0000637001
N
0.425
Sjc_0051340
Schistosoma japonicum
Sjc_0051340
N
0.424
ENSPANG00000010595
Papio anubis
ENSPANG00000010595
N
0.423
A_00070
Schistosoma haematobium
A_00070
N
0.421
SCUD_0001034301
Schistosoma curassoni
SCUD_0001034301
N
0.421
SMRZ_0000842001
Schistosoma margrebowiei
SMRZ_0000842001
N
0.421
SMTD_0001017101
Schistosoma mattheei
SMTD_0001017101
N
0.421
BGIBMGA001132
Bombyx mori
BGIBMGA001132
N
0.419
ENSCJAG00000004401
Callithrix jacchus
ENSCJAG00000004401
N
0.419
ENSOARG00000010383
Ovis aries
ENSOARG00000010383
N
0.419
ENSOARG00000015382
Ovis aries
ENSOARG00000015382
N
0.419
ENSOARG00000015955
Ovis aries
ENSOARG00000015955
N
0.419
ENSPANG00000007527
Papio anubis
ENSPANG00000007527
N
0.419
ENSPFOG00000008464
Poecilia formosa
ENSPFOG00000008464
N
0.419
Smp_103530
Schistosoma mansoni
Smp_103530
N
0.419
Myotis_brandtii_Hmgb2_10018437
Myotis brandtii
Myotis_brandtii_Hmgb2_10018437
N
0.419
A_05510
Schistosoma haematobium
A_05510
N
0.419
SCUD_0000067701
Schistosoma curassoni
SCUD_0000067701
N
0.419
SMRZ_0000146101
Schistosoma margrebowiei
SMRZ_0000146101
N
0.419
SMRZ_0001808901
Schistosoma margrebowiei
SMRZ_0001808901
N
0.419
SROB_0001061001
Schistosoma rodhaini
SROB_0001061001
N
0.419
T265_10726
Opisthorchis viverrini
T265_10726
N
0.419
Smp_100090
Schistosoma mansoni
Smp_100090
N
0.418
SMU15002907
Schmidtea mediterranea
SMU15002907
N
0.418
SROB_0000500401
Schistosoma rodhaini
SROB_0000500401
N
0.418
AAH44009
Xenopus laevis
AAH44009
N
0.417
SMU15013231
Schmidtea mediterranea
SMU15013231
N
0.417