CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TELCIR_06008
(
Teladorsagia circumcincta
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
TELCIR_06008
T337168_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TELCIR_06008
Sox
2
58
CYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFYELAQKDAERYQAEVAAYG
TELCIR_06008
Sox
76
144
PKRALSAFFFFSQDRRPEVQQMHPEWKVGQVAQELGRMWKNVSMDEKDMYERKALADKERYAEEMRDYK
Links
Other
Sox
family TFs
Other
Teladorsagia circumcincta
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI00860100
Haemonchus contortus
HCOI00860100
N
0.609
NBR_0000911001
Nippostrongylus brasiliensis
NBR_0000911001
N
0.609
NECAME_09126
Necator americanus
NECAME_09126
N
0.609
TELCIR_07111
Teladorsagia circumcincta
TELCIR_07111
N
0.609
ACOC_0000768601
Angiostrongylus costaricensis
ACOC_0000768601
N
0.607
CJA42049
Caenorhabditis japonica
CJA42049
N
0.599
Hba_13817
Heterorhabditis bacteriophora
Hba_13817
N
0.598
BXY_1714600
Bursaphelenchus xylophilus
BXY_1714600
N
0.588
ASU_03902
Ascaris suum
ASU_03902
N
0.585
EVEC_0000577301
Enterobius vermicularis
EVEC_0000577301
N
0.585
PEQ_0000150901
Parascaris equorum
PEQ_0000150901
N
0.585
TCLT_0000879501
Thelazia callipaeda
TCLT_0000879501
N
0.585
TCNE_0000567001
Toxocara canis
TCNE_0000567001
N
0.585
Bm4180
Brugia malayi
Bm4180
N
0.582
LOAG_04936
Loa loa
LOAG_04936
N
0.582
WBGene00245261
Onchocerca volvulus
WBGene00245261
N
0.582
EEL_0000068601
Elaeophora elaphi
EEL_0000068601
N
0.582
nAv.1.0.1.g02101
Acanthocheilonema viteae
nAv.1.0.1.g02101
N
0.582
nDi.2.2.2.g04979
Dirofilaria immitis
nDi.2.2.2.g04979
N
0.582
SMUV_0000232601
Syphacia muris
SMUV_0000232601
N
0.581
L892_g17551
Steinernema scapterisci
L892_g17551
N
0.578
L893_g5947
Steinernema glaseri
L893_g5947
N
0.578
L596_g22130
Steinernema carpocapsae
L596_g22130
N
0.575
L889_g13533
Steinernema feltiae
L889_g13533
N
0.573
CJA09678
Caenorhabditis japonica
CJA09678
N
0.568
CBG17468
Caenorhabditis briggsae
CBG17468
N
0.565
CBN17977
Caenorhabditis brenneri
CBN17977
N
0.564
hmg-1.2
Caenorhabditis elegans
WBGene00001972
N
0.564
DME_0001055201
Dracunculus medinensis
DME_0001055201
N
0.562
ANCCAN_10156
Ancylostoma caninum
ANCCAN_10156
N
0.557
D918_07195
Trichuris suis
D918_07195
N
0.555
TTRE_0000338301
Trichuris trichiura
TTRE_0000338301
N
0.555
PTRK_0000986200
Parastrongyloides trichosuri
PTRK_0000986200
N
0.552
SPAL_0001030300
Strongyloides papillosus
SPAL_0001030300
N
0.552
SSTP_0000371800
Strongyloides stercoralis
SSTP_0000371800
N
0.552
SVE_0494300
Strongyloides venezuelensis
SVE_0494300
N
0.552
Ppa-hmg-1.2
Pristionchus pacificus
PPA02361
N
0.551
scaffold580-EXSNAP2012.5
Pristionchus exspectatus
scaffold580-EXSNAP2012.5
N
0.551
ASIM_0000048401
Anisakis simplex
ASIM_0000048401
N
0.550
TMUE_s0235000800
Trichuris muris
TMUE_s0235000800
N
0.539
GPUH_0001544201
Gongylonema pulchrum
GPUH_0001544201
N
0.533
SBAD_0000405201
Soboliphyme baturini
SBAD_0000405201
N
0.533
nRc.2.0.1.g43473
Romanomermis culicivorax
nRc.2.0.1.g43473
N
0.532
WUBG_12099
Wuchereria bancrofti
WUBG_12099
N
0.530
D917_08189
Trichinella nativa
D917_08189
N
0.530
ACAC_0001052301
Angiostrongylus cantonensis
ACAC_0001052301
N
0.525
ANCCEY_10333
Ancylostoma ceylanicum
ANCCEY_10333
N
0.523
CRE02943
Caenorhabditis remanei
CRE02943
N
0.519
EFV57410
Trichinella spiralis
EFV57410
N
0.518
D917_01254
Trichinella nativa
D917_01254
N
0.518
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2
N
0.506
genemark-nMf.1.1.scaf06964-processed-gene-0.3
Meloidogyne floridensis
genemark-nMf.1.1.scaf06964-processed-gene-0.3
N
0.506
RSKR_0000605700
Rhabditophanes kr3021
RSKR_0000605700
N
0.501
EFV53345
Trichinella spiralis
EFV53345
N
0.492
GPLIN_000727200
Globodera pallida
GPLIN_000727200
N
0.492
nLs.2.1.2.g00300
Litomosoides sigmodontis
nLs.2.1.2.g00300
N
0.483
ENSMMUG00000018606
Macaca mulatta
ENSMMUG00000018606
N
0.471
Minc03268
Meloidogyne incognita
Minc03268
N
0.450
Minc08988
Meloidogyne incognita
Minc08988
N
0.450
MhA1_Contig113.frz3.gene9
Meloidogyne hapla
MhA1_Contig113.frz3.gene9
N
0.450
ENSOARG00000005357
Ovis aries
ENSOARG00000005357
N
0.447
AABR07040430.1
Rattus norvegicus
ENSRNOG00000056486
N
0.437
ENSBTAG00000020685
Bos taurus
ENSBTAG00000020685
N
0.435
BXY_1555400
Bursaphelenchus xylophilus
BXY_1555400
N
0.429
AFAF009984
Anopheles farauti
AFAF009984
N
0.427
GL15829
Drosophila persimilis
FBgn0153433
N
0.417