CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BXY_1555400
(
Bursaphelenchus xylophilus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
BXY_1555400
T336106_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BXY_1555400.1
Sox
49
115
GKTSPYGFFVKMCYEEHKRKFPHENVLVTEISKKCSEKWKTMNEIEKKRFFDLAQKDAERYHAEITA
BXY_1555400.1
Sox
135
203
PKRALSAFFFFSNEQRNKIQSQYPSWKVGQIAQELGRAWKALSEEERMVYEKKAVDDKERYNMEMKSYR
Links
Other
Sox
family TFs
Other
Bursaphelenchus xylophilus
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PTRK_0000986200
Parastrongyloides trichosuri
PTRK_0000986200
N
0.604
SPAL_0001030300
Strongyloides papillosus
SPAL_0001030300
N
0.604
SSTP_0000371800
Strongyloides stercoralis
SSTP_0000371800
N
0.604
SVE_0494300
Strongyloides venezuelensis
SVE_0494300
N
0.604
RSKR_0000605700
Rhabditophanes kr3021
RSKR_0000605700
N
0.603
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2
N
0.589
DME_0001055201
Dracunculus medinensis
DME_0001055201
N
0.589
genemark-nMf.1.1.scaf06964-processed-gene-0.3
Meloidogyne floridensis
genemark-nMf.1.1.scaf06964-processed-gene-0.3
N
0.589
ASU_03902
Ascaris suum
ASU_03902
N
0.585
EVEC_0000577301
Enterobius vermicularis
EVEC_0000577301
N
0.585
PEQ_0000150901
Parascaris equorum
PEQ_0000150901
N
0.585
SMUV_0000232601
Syphacia muris
SMUV_0000232601
N
0.585
TCLT_0000879501
Thelazia callipaeda
TCLT_0000879501
N
0.585
TCNE_0000567001
Toxocara canis
TCNE_0000567001
N
0.585
Bm4180
Brugia malayi
Bm4180
N
0.582
LOAG_04936
Loa loa
LOAG_04936
N
0.582
WBGene00245261
Onchocerca volvulus
WBGene00245261
N
0.582
EEL_0000068601
Elaeophora elaphi
EEL_0000068601
N
0.582
nAv.1.0.1.g02101
Acanthocheilonema viteae
nAv.1.0.1.g02101
N
0.582
nDi.2.2.2.g04979
Dirofilaria immitis
nDi.2.2.2.g04979
N
0.582
L596_g22130
Steinernema carpocapsae
L596_g22130
N
0.580
L892_g17551
Steinernema scapterisci
L892_g17551
N
0.580
L893_g5947
Steinernema glaseri
L893_g5947
N
0.580
Ppa-hmg-1.2
Pristionchus pacificus
PPA02361
N
0.577
scaffold580-EXSNAP2012.5
Pristionchus exspectatus
scaffold580-EXSNAP2012.5
N
0.577
L889_g13533
Steinernema feltiae
L889_g13533
N
0.575
CRE02943
Caenorhabditis remanei
CRE02943
N
0.572
hmg-1.2
Caenorhabditis elegans
WBGene00001972
N
0.572
SBAD_0000405201
Soboliphyme baturini
SBAD_0000405201
N
0.570
D918_07195
Trichuris suis
D918_07195
N
0.568
TMUE_s0235000800
Trichuris muris
TMUE_s0235000800
N
0.568
TTRE_0000338301
Trichuris trichiura
TTRE_0000338301
N
0.568
nRc.2.0.1.g43473
Romanomermis culicivorax
nRc.2.0.1.g43473
N
0.567
D917_08189
Trichinella nativa
D917_08189
N
0.565
ACOC_0000768601
Angiostrongylus costaricensis
ACOC_0000768601
N
0.561
Hba_13817
Heterorhabditis bacteriophora
Hba_13817
N
0.561
HCOI00860100
Haemonchus contortus
HCOI00860100
N
0.561
NBR_0000911001
Nippostrongylus brasiliensis
NBR_0000911001
N
0.561
NECAME_09126
Necator americanus
NECAME_09126
N
0.561
TELCIR_07111
Teladorsagia circumcincta
TELCIR_07111
N
0.561
WUBG_12099
Wuchereria bancrofti
WUBG_12099
N
0.560
ANCCAN_10156
Ancylostoma caninum
ANCCAN_10156
N
0.553
ASIM_0000048401
Anisakis simplex
ASIM_0000048401
N
0.547
CBN17977
Caenorhabditis brenneri
CBN17977
N
0.543
CBG17468
Caenorhabditis briggsae
CBG17468
N
0.542
CJA09678
Caenorhabditis japonica
CJA09678
N
0.540
EFV57410
Trichinella spiralis
EFV57410
N
0.536
D917_01254
Trichinella nativa
D917_01254
N
0.536
EFV53345
Trichinella spiralis
EFV53345
N
0.529
nLs.2.1.2.g00300
Litomosoides sigmodontis
nLs.2.1.2.g00300
N
0.518
CJA42049
Caenorhabditis japonica
CJA42049
N
0.509
ANCCEY_10333
Ancylostoma ceylanicum
ANCCEY_10333
N
0.505
Minc03268
Meloidogyne incognita
Minc03268
N
0.503
Minc08988
Meloidogyne incognita
Minc08988
N
0.503
MhA1_Contig113.frz3.gene9
Meloidogyne hapla
MhA1_Contig113.frz3.gene9
N
0.503
ACAC_0001052301
Angiostrongylus cantonensis
ACAC_0001052301
N
0.500
Minc01077
Meloidogyne incognita
Minc01077
N
0.472
EmuJ_001049000
Echinococcus multilocularis
EmuJ_001049000
N
0.472
MCOS_0000526101
Mesocestoides corti
MCOS_0000526101
N
0.472
TsM_000115400
Taenia solium
TsM_000115400
N
0.472
GPUH_0001544201
Gongylonema pulchrum
GPUH_0001544201
N
0.471
BXY_1714600
Bursaphelenchus xylophilus
BXY_1714600
N
0.456
HelroG157878
Helobdella robusta
HelroG157878
N
0.455
Smp_000980
Schistosoma mansoni
Smp_000980
N
0.449
SCUD_0000020101
Schistosoma curassoni
SCUD_0000020101
N
0.449
SMTD_0001194601
Schistosoma mattheei
SMTD_0001194601
N
0.449
SROB_0000153901
Schistosoma rodhaini
SROB_0000153901
N
0.449
HelroG87827
Helobdella robusta
HelroG87827
N
0.447
PXEA_0002175501
Protopolystoma xenopodis
PXEA_0002175501
N
0.447
CapteG158220
Capitella teleta
CapteG158220
N
0.445
T265_12733
Opisthorchis viverrini
T265_12733
N
0.440
ENSFCAG00000028961
Felis catus
ENSFCAG00000028961
N
0.437
AAI68534
Xenopus tropicalis
AAI68534
N
0.436
ECANG7_02036
Echinococcus canadensis
ECANG7_02036
N
0.435
TTAC_0000225801
Hydatigera taeniaeformis
TTAC_0000225801
N
0.435
CGI_10023724
Crassostrea gigas
CGI_10023724
N
0.434
ENSAMXG00000014031
Astyanax mexicanus
ENSAMXG00000014031
N
0.433
TELCIR_06008
Teladorsagia circumcincta
TELCIR_06008
N
0.429
ENSOCUG00000021132
Oryctolagus cuniculus
ENSOCUG00000021132
N
0.426
SMAR013695
Strigamia maritima
SMAR013695
N
0.426
hmgb1a
Tetraodon nigroviridis
ENSTNIG00000009909
N
0.423
SMU15030256
Schmidtea mediterranea
SMU15030256
N
0.421
D915_00818
Fasciola hepatica
D915_00818
N
0.421
ENSPFOG00000004794
Poecilia formosa
ENSPFOG00000004794
N
0.419
PXEA_0000566701
Protopolystoma xenopodis
PXEA_0000566701
N
0.418
Hmgb2l1
Rattus norvegicus
ENSRNOG00000013167
N
0.417
RGD1561694
Rattus norvegicus
ENSRNOG00000029107
N
0.417
Hmgb2
Rattus norvegicus
ENSRNOG00000033321
N
0.417
ENSONIG00000019935
Oreochromis niloticus
ENSONIG00000019935
N
0.416
hmgb2b
Oryzias latipes
ENSORLG00000018687
N
0.416
ENSXMAG00000011106
Xiphophorus maculatus
ENSXMAG00000011106
N
0.416