SROB_0000153901 (Schistosoma rodhaini)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SROB_0000153901 T337010_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0000153901-mRNA-1 Sox 10 80
SROB_0000153901-mRNA-1 Sox 100 166

Links

Other Sox family TFs
Other Schistosoma rodhaini TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Smp_000980 Schistosoma mansoni Smp_000980 N 0.741
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.741
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.741
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.687
T265_12733 Opisthorchis viverrini T265_12733 N 0.680
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.637
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.633
TsM_000115400 Taenia solium TsM_000115400 N 0.633
D915_00818 Fasciola hepatica D915_00818 N 0.623
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.619
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.609
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.609
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.600
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.595
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.595
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.590
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.590
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.590
D915_15256 Fasciola hepatica D915_15256 N 0.548
csin110255 Clonorchis sinensis csin110255 N 0.544
T265_14643 Opisthorchis viverrini T265_14643 N 0.544
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.531
HelroG157878 Helobdella robusta HelroG157878 N 0.527
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.523
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.523
SMAR013695 Strigamia maritima SMAR013695 N 0.512
AAEL011380 Aedes aegypti AAEL011380 N 0.511
ADAC001494 Anopheles darlingi ADAC001494 N 0.511
AGAP000005 Anopheles gambiae AGAP000005 N 0.511
AALB006743 Anopheles albimanus AALB006743 N 0.511
AARA010318 Anopheles arabiensis AARA010318 N 0.511
AATE018776 Anopheles atroparvus AATE018776 N 0.511
ACUA021022 Anopheles culicifacies ACUA021022 N 0.511
ADIR011701 Anopheles dirus ADIR011701 N 0.511
AEPI002924 Anopheles epiroticus AEPI002924 N 0.511
AFAF003948 Anopheles farauti AFAF003948 N 0.511
AFUN010134 Anopheles funestus AFUN010134 N 0.511
AMAM015540 Anopheles maculatus AMAM015540 N 0.511
AMEC021909 Anopheles melas AMEC021909 N 0.511
AMEM017336 Anopheles merus AMEM017336 N 0.511
AMIN005344 Anopheles minimus AMIN005344 N 0.511
ASIS000124 Anopheles sinensis ASIS000124 N 0.511
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.510
MDOA008812 Musca domestica MDOA008812 N 0.509
SMU15002907 Schmidtea mediterranea SMU15002907 N 0.506
ISCW017350 Ixodes scapularis ISCW017350 N 0.505
Smp_103530 Schistosoma mansoni Smp_103530 N 0.505
BGLB010942 Biomphalaria glabrata BGLB010942 N 0.505
A_05510 Schistosoma haematobium A_05510 N 0.505
SCUD_0000067701 Schistosoma curassoni SCUD_0000067701 N 0.505
SMRZ_0000146101 Schistosoma margrebowiei SMRZ_0000146101 N 0.505
SMRZ_0001808901 Schistosoma margrebowiei SMRZ_0001808901 N 0.505
SROB_0001061001 Schistosoma rodhaini SROB_0001061001 N 0.505
HelroG87827 Helobdella robusta HelroG87827 N 0.504
TRE_0000506801 Trichobilharzia regenti TRE_0000506801 N 0.503
SMU15016767 Schmidtea mediterranea SMU15016767 N 0.501
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.500
Dsp1 Drosophila melanogaster FBgn0011764 N 0.494
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.494
GF19115 Drosophila ananassae FBgn0096126 N 0.494
GG17955 Drosophila erecta FBgn0110175 N 0.494
GH12282 Drosophila grimshawi FBgn0119761 N 0.494
GI10980 Drosophila mojavensis FBgn0133743 N 0.494
GD17278 Drosophila simulans FBgn0188840 N 0.494
GJ19445 Drosophila virilis FBgn0206588 N 0.494
GK25058 Drosophila willistoni FBgn0227017 N 0.494
GE17263 Drosophila yakuba FBgn0234741 N 0.494
LCUP007363 Lucilia cuprina LCUP007363 N 0.494
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N 0.486
AQUA004962 Anopheles quadriannulatus AQUA004962 N 0.483
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N 0.483
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N 0.483
PTRK_0000986200 Parastrongyloides trichosuri PTRK_0000986200 N 0.483
SPAL_0001030300 Strongyloides papillosus SPAL_0001030300 N 0.483
SSTP_0000371800 Strongyloides stercoralis SSTP_0000371800 N 0.483
SVE_0494300 Strongyloides venezuelensis SVE_0494300 N 0.483
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.480
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.480
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.480
BGIBMGA001132 Bombyx mori BGIBMGA001132 N 0.479
ENSPMAG00000007397 Petromyzon marinus ENSPMAG00000007397 N 0.479
Smp_100090 Schistosoma mansoni Smp_100090 N 0.478
MCOS_0000726501 Mesocestoides corti MCOS_0000726501 N 0.478
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.478
HMEL007340 Heliconius melpomene HMEL007340 N 0.477
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.477
ACEP16613 Atta cephalotes ACEP16613 N 0.475
NV15664 Nasonia vitripennis NV15664 N 0.475
SINV22586 Solenopsis invicta SINV22586 N 0.475
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.475
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.475
HDID_0000408601 Hymenolepis diminuta HDID_0000408601 N 0.475
HNAJ_0000974401 Hymenolepis nana HNAJ_0000974401 N 0.475
HmN_000813000 Hymenolepis microstoma HmN_000813000 N 0.471
CapteG158220 Capitella teleta CapteG158220 N 0.470
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.470
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.470
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.470
hmgb1a Oryzias latipes ENSORLG00000003400 N 0.469
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.468
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.468
hmgb2a Danio rerio ENSDARG00000029722 N 0.467
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.466
hmgb2b Oryzias latipes ENSORLG00000018687 N 0.465
PHUM006290 Pediculus humanus PHUM006290 N 0.465
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.465
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N 0.464
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N 0.463
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.463
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.463
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.463
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.463
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.463
A_00070 Schistosoma haematobium A_00070 N 0.463
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N 0.463
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N 0.463
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N 0.463
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.461
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.461
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.460
BAA06440 Xenopus laevis BAA06440 N 0.458
TRE_0000690301 Trichobilharzia regenti TRE_0000690301 N 0.458
hmgb1a Danio rerio ENSDARG00000099175 N 0.457
hmgb1b Takifugu rubripes ENSTRUG00000004822 N 0.457
ENSGMOG00000010060 Gadus morhua ENSGMOG00000010060 N 0.455
ENSPFOG00000004794 Poecilia formosa ENSPFOG00000004794 N 0.454
ENSXMAG00000011106 Xiphophorus maculatus ENSXMAG00000011106 N 0.454
AATE010886 Anopheles atroparvus AATE010886 N 0.453
CGI_10023724 Crassostrea gigas CGI_10023724 N 0.452
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.452
D918_07195 Trichuris suis D918_07195 N 0.452
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.452
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.452
NECAME_09126 Necator americanus NECAME_09126 N 0.452
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.452
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.452
ENSONIG00000019935 Oreochromis niloticus ENSONIG00000019935 N 0.451
hmgb2b Tetraodon nigroviridis ENSTNIG00000004824 N 0.451
hmgb2b Takifugu rubripes ENSTRUG00000005015 N 0.451
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.451
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.451
T265_10726 Opisthorchis viverrini T265_10726 N 0.451
HMGB2 Macaca mulatta ENSMMUG00000020008 N 0.450
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.449
BXY_1555400 Bursaphelenchus xylophilus BXY_1555400 N 0.449
RSKR_0000605700 Rhabditophanes kr3021 RSKR_0000605700 N 0.449
SMU15027649 Schmidtea mediterranea SMU15027649 N 0.448
DILT_0000548601 Diphyllobothrium latum DILT_0000548601 N 0.448
AAI68534 Xenopus tropicalis AAI68534 N 0.447
hmgb2.S Xenopus laevis XB-GENE-1000251 N 0.447
ASIS009950 Anopheles sinensis ASIS009950 N 0.447
LotgiG200052 Lottia gigantea LotgiG200052 N 0.446
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.445
YQE_03203 Dendroctonus ponderosae YQE_03203 N 0.445
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N 0.445
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N 0.445
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.445
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.444
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N 0.444
ENSAMXG00000014031 Astyanax mexicanus ENSAMXG00000014031 N 0.442
D917_08189 Trichinella nativa D917_08189 N 0.442
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N 0.441
DAPPUDRAFT_306496 Daphnia pulex DAPPUDRAFT_306496 N 0.440
HelroG157726 Helobdella robusta HelroG157726 N 0.439
hmgb1a Tetraodon nigroviridis ENSTNIG00000009909 N 0.438
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.437
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.436
L889_g13533 Steinernema feltiae L889_g13533 N 0.436
L893_g5947 Steinernema glaseri L893_g5947 N 0.436
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N 0.436
EFV57410 Trichinella spiralis EFV57410 N 0.435
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.435
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.435
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.435
D917_01254 Trichinella nativa D917_01254 N 0.435
Aqu1.227714 Amphimedon queenslandica Aqu1.227714 N 0.434
hmgb2b Gasterosteus aculeatus ENSGACG00000001173 N 0.434
Bm4180 Brugia malayi Bm4180 N 0.433
LOAG_04936 Loa loa LOAG_04936 N 0.433
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.433
ASU_03902 Ascaris suum ASU_03902 N 0.433
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.433
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.433
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.433
L892_g17551 Steinernema scapterisci L892_g17551 N 0.433
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.433
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.433
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.433
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.433
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.433
hmgb3b Danio rerio ENSDARG00000006408 N 0.432
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.432
ENSPFOG00000004533 Poecilia formosa ENSPFOG00000004533 N 0.432
ENSXMAG00000006844 Xiphophorus maculatus ENSXMAG00000006844 N 0.432
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.432
ECANG7_05481 Echinococcus canadensis ECANG7_05481 N 0.432
EmuJ_000768300 Echinococcus multilocularis EmuJ_000768300 N 0.432
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.430
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.430
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.430
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.430
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.430
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.430
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.430
csin112095 Clonorchis sinensis csin112095 N 0.430
ENSGMOG00000010657 Gadus morhua ENSGMOG00000010657 N 0.429
SMU15013231 Schmidtea mediterranea SMU15013231 N 0.429
TsM_000088100 Taenia solium TsM_000088100 N 0.429
CBG17468 Caenorhabditis briggsae CBG17468 N 0.428
CJA09678 Caenorhabditis japonica CJA09678 N 0.428
ADIR000367 Anopheles dirus ADIR000367 N 0.427
TASK_0000460901 Taenia asiatica TASK_0000460901 N 0.427
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.426
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N 0.426
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N 0.426
AAH44009 Xenopus laevis AAH44009 N 0.425
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N 0.424
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.424
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.424
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.424
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.424
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.424
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.424
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N 0.424
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.424
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.424
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.424
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N 0.424
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.424
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.424
CBN17977 Caenorhabditis brenneri CBN17977 N 0.423
hmg-1.2 Caenorhabditis elegans WBGene00001972 N 0.423
EFV53345 Trichinella spiralis EFV53345 N 0.421
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N 0.421
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N 0.421
SMU15029911 Schmidtea mediterranea SMU15029911 N 0.421
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N 0.419
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N 0.418
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N 0.416
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N 0.415