CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000010657
(
Gadus morhua
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSGMOG00000010657
T328200_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000011409
Sox
5
78
PKKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSPKEKGKFEDRAKLDKVRYEKEMRTYI
ENSGMOP00000011409
Sox
94
162
PKRPPSAFFLFCADFRQKVKTDTPGLSIGDTAKKLGEMWNNSSPEDKQPYEKKASKLKEKYDKDMIAYR
Links
Other
Sox
family TFs
Other
Gadus morhua
TFs
258 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSXMAG00000006844
Xiphophorus maculatus
ENSXMAG00000006844
N
0.657
ENSONIG00000005505
Oreochromis niloticus
ENSONIG00000005505
N
0.652
ENSPFOG00000004533
Poecilia formosa
ENSPFOG00000004533
N
0.640
ENSCPOG00000003985
Cavia porcellus
ENSCPOG00000003985
N
0.627
ENSECAG00000005186
Equus caballus
ENSECAG00000005186
N
0.627
HMGB1
Microcebus murinus
ENSMICG00000006213
N
0.627
ENSMMUG00000001275
Macaca mulatta
ENSMMUG00000001275
N
0.627
ENSMODG00000009238
Monodelphis domestica
ENSMODG00000009238
N
0.627
ENSOARG00000017078
Ovis aries
ENSOARG00000017078
N
0.627
ENSPANG00000005029
Papio anubis
ENSPANG00000005029
N
0.627
ENSPANG00000011105
Papio anubis
ENSPANG00000011105
N
0.627
Hmg1l1
Rattus norvegicus
ENSRNOG00000034130
N
0.627
Hmg1l1
Rattus norvegicus
ENSRNOG00000051482
N
0.627
AC135696.1
Rattus norvegicus
ENSRNOG00000058908
N
0.627
ENSSTOG00000000443
Ictidomys tridecemlineatus
ENSSTOG00000000443
N
0.627
hmgb2.S
Xenopus laevis
XB-GENE-1000251
N
0.626
AAC59859
Xenopus laevis
AAC59859
N
0.624
AAH73449
Xenopus laevis
AAH73449
N
0.624
ENSCJAG00000008378
Callithrix jacchus
ENSCJAG00000008378
N
0.622
ENSCJAG00000008384
Callithrix jacchus
ENSCJAG00000008384
N
0.620
ENSOGAG00000032152
Otolemur garnettii
ENSOGAG00000032152
N
0.619
ENSPPYG00000011668
Pongo abelii
ENSPPYG00000011668
N
0.618
hmgb1b
Takifugu rubripes
ENSTRUG00000004822
N
0.617
BAA06440
Xenopus laevis
BAA06440
N
0.616
HMGB1
Bos taurus
ENSBTAG00000014862
N
0.614
ENSAMXG00000014832
Astyanax mexicanus
ENSAMXG00000014832
N
0.610
ENSECAG00000003655
Equus caballus
ENSECAG00000003655
N
0.608
hmgb1b
Gasterosteus aculeatus
ENSGACG00000011447
N
0.604
LOC108350839
Rattus norvegicus
ENSRNOG00000038437
N
0.603
ENSOGAG00000028411
Otolemur garnettii
ENSOGAG00000028411
N
0.601
hmgb1a
Danio rerio
ENSDARG00000099175
N
0.600
ENSOARG00000011611
Ovis aries
ENSOARG00000011611
N
0.596
Myotis_brandtii_Hmgb1_10026956
Myotis brandtii
Myotis_brandtii_Hmgb1_10026956
N
0.594
Myotis_brandtii_Hmgb1_10003213
Myotis brandtii
Myotis_brandtii_Hmgb1_10003213
N
0.593
ENSTBEG00000016187
Tupaia belangeri
ENSTBEG00000016187
N
0.591
ENSOCUG00000004133
Oryctolagus cuniculus
ENSOCUG00000004133
N
0.590
Myotis_brandtii_Hmgb2_10018437
Myotis brandtii
Myotis_brandtii_Hmgb2_10018437
N
0.587
ENSOARG00000010383
Ovis aries
ENSOARG00000010383
N
0.582
ENSOARG00000015382
Ovis aries
ENSOARG00000015382
N
0.582
ENSOARG00000015955
Ovis aries
ENSOARG00000015955
N
0.582
ENSPANG00000007527
Papio anubis
ENSPANG00000007527
N
0.582
Hmgb2l1
Rattus norvegicus
ENSRNOG00000013167
N
0.582
Hmgb2
Rattus norvegicus
ENSRNOG00000033321
N
0.582
LOC100911637
Rattus norvegicus
ENSRNOG00000048094
N
0.581
LOC100911637
Rattus norvegicus
ENSRNOG00000048471
N
0.581
ENSCJAG00000022832
Callithrix jacchus
ENSCJAG00000022832
N
0.579
RGD1561694
Rattus norvegicus
ENSRNOG00000029107
N
0.579
ENSDNOG00000005537
Dasypus novemcinctus
ENSDNOG00000005537
N
0.572
hmgb1a
Tetraodon nigroviridis
ENSTNIG00000009909
N
0.572
Hmgb1-ps3
Rattus norvegicus
ENSRNOG00000032420
N
0.569
ENSOCUG00000021132
Oryctolagus cuniculus
ENSOCUG00000021132
N
0.568
hmgb2a
Danio rerio
ENSDARG00000029722
N
0.567
ENSGGOG00000007804
Gorilla gorilla
ENSGGOG00000007804
N
0.567
ENSPFOG00000008464
Poecilia formosa
ENSPFOG00000008464
N
0.566
HMGB2
Sus scrofa
ENSSSCG00000009704
N
0.563
hmgb1a
Oryzias latipes
ENSORLG00000003400
N
0.559
ENSTBEG00000014925
Tupaia belangeri
ENSTBEG00000014925
N
0.555
ENSMICG00000016224
Microcebus murinus
ENSMICG00000016224
N
0.553
hmgb2b
Gasterosteus aculeatus
ENSGACG00000001173
N
0.552
AABR07025074.1
Rattus norvegicus
ENSRNOG00000032550
N
0.552
hmgb1a
Takifugu rubripes
ENSTRUG00000008452
N
0.552
ENSOCUG00000023449
Oryctolagus cuniculus
ENSOCUG00000023449
N
0.551
ENSTBEG00000009427
Tupaia belangeri
ENSTBEG00000009427
N
0.551
ENSBTAP00000049357-D1
Bos grunniens
ENSBTAP00000049357-D1
N
0.548
HMGB2
Macaca mulatta
ENSMMUG00000020008
N
0.543
ENSOGAG00000032240
Otolemur garnettii
ENSOGAG00000032240
N
0.543
ENSPFOG00000004794
Poecilia formosa
ENSPFOG00000004794
N
0.542
hmgb2b
Tetraodon nigroviridis
ENSTNIG00000004824
N
0.542
ENSFCAG00000028961
Felis catus
ENSFCAG00000028961
N
0.540
AABR07019870.1
Rattus norvegicus
ENSRNOG00000038033
N
0.540
ENSMLUG00000028530
Myotis lucifugus
ENSMLUG00000028530
N
0.539
hmgb2b
Takifugu rubripes
ENSTRUG00000005015
N
0.539
ENSXMAG00000011106
Xiphophorus maculatus
ENSXMAG00000011106
N
0.539
ENSMMUP00000039817
Macaca fascicularis
ENSMMUP00000039817
N
0.539
ENSOCUG00000027747
Oryctolagus cuniculus
ENSOCUG00000027747
N
0.537
ENSTBEG00000012989
Tupaia belangeri
ENSTBEG00000012989
N
0.537
ENSMMUG00000002662
Macaca mulatta
ENSMMUG00000002662
N
0.531
ENSONIG00000019935
Oreochromis niloticus
ENSONIG00000019935
N
0.529
hmgb2b
Oryzias latipes
ENSORLG00000018687
N
0.529
ENSMODG00000004606
Monodelphis domestica
ENSMODG00000004606
N
0.528
ENSOGAG00000034801
Otolemur garnettii
ENSOGAG00000034801
N
0.528
ENSDNOG00000046844
Dasypus novemcinctus
ENSDNOG00000046844
N
0.526
ENSGGOG00000025109
Gorilla gorilla
ENSGGOG00000025109
N
0.524
hmgb3b
Danio rerio
ENSDARG00000006408
N
0.523
ENSGMOG00000010060
Gadus morhua
ENSGMOG00000010060
N
0.522
ENSOGAG00000032147
Otolemur garnettii
ENSOGAG00000032147
N
0.522
ENSCJAG00000014214
Callithrix jacchus
ENSCJAG00000014214
N
0.520
ENSTBEG00000017117
Tupaia belangeri
ENSTBEG00000017117
N
0.519
ENSBTAG00000031711
Bos taurus
ENSBTAG00000031711
N
0.518
ENSMPUG00000018359
Mustela putorius furo
ENSMPUG00000018359
N
0.518
LOC688583
Rattus norvegicus
ENSRNOG00000050910
N
0.518
ENSSSCG00000020770
Sus scrofa
ENSSSCG00000020770
N
0.518
ENSSSCG00000024283
Sus scrofa
ENSSSCG00000024283
N
0.518
RGD1563668
Rattus norvegicus
ENSRNOG00000038478
N
0.516
ENSCSAG00000013078
Chlorocebus sabaeus
ENSCSAG00000013078
N
0.515
HMGB3
Oryctolagus cuniculus
ENSOCUG00000024959
N
0.515
ENSCAFG00000023930
Canis familiaris
ENSCAFG00000023930
N
0.514
ENSCJAG00000033322
Callithrix jacchus
ENSCJAG00000033322
N
0.514
ENSSTOG00000012404
Ictidomys tridecemlineatus
ENSSTOG00000012404
N
0.514
ENSBTAG00000020685
Bos taurus
ENSBTAG00000020685
N
0.513
ENSDNOG00000047452
Dasypus novemcinctus
ENSDNOG00000047452
N
0.513
ENSOGAG00000027410
Otolemur garnettii
ENSOGAG00000027410
N
0.512
ENSOGAG00000030563
Otolemur garnettii
ENSOGAG00000030563
N
0.512
ENSTBEG00000005874
Tupaia belangeri
ENSTBEG00000005874
N
0.511
ENSTBEG00000015340
Tupaia belangeri
ENSTBEG00000015340
N
0.509
ENSTSYG00000003868
Tarsius syrichta
ENSTSYG00000003868
N
0.509
ENSPMAG00000007397
Petromyzon marinus
ENSPMAG00000007397
N
0.506
ENSMMUG00000019832
Macaca mulatta
ENSMMUG00000019832
N
0.505
ENSCSAVG00000000341
Ciona savignyi
ENSCSAVG00000000341
N
0.504
ENSMEUG00000011289
Macropus eugenii
ENSMEUG00000011289
N
0.504
AAH44009
Xenopus laevis
AAH44009
N
0.504
ENSOGAG00000033437
Otolemur garnettii
ENSOGAG00000033437
N
0.503
ENSOARG00000005357
Ovis aries
ENSOARG00000005357
N
0.501
hmg1/2
Ciona intestinalis
ENSCING00000004075
N
0.500
ENSOGAG00000030052
Otolemur garnettii
ENSOGAG00000030052
N
0.500
ENSOGAG00000028007
Otolemur garnettii
ENSOGAG00000028007
N
0.497
ENSPANG00000010595
Papio anubis
ENSPANG00000010595
N
0.495
Myotis_brandtii_HMGB3_10026974
Myotis brandtii
Myotis_brandtii_HMGB3_10026974
N
0.495
ENSCJAG00000004401
Callithrix jacchus
ENSCJAG00000004401
N
0.494
ENSOGAG00000029748
Otolemur garnettii
ENSOGAG00000029748
N
0.493
ENSSTOG00000007009
Ictidomys tridecemlineatus
ENSSTOG00000007009
N
0.493
ENSGGOG00000025769
Gorilla gorilla
ENSGGOG00000025769
N
0.492
ENSCJAG00000007095
Callithrix jacchus
ENSCJAG00000007095
N
0.491
HMGB1
Monodelphis domestica
ENSMODG00000004443
N
0.489
tetur02g08260
Tetranychus urticae
tetur02g08260
N
0.489
tetur02g08340
Tetranychus urticae
tetur02g08340
N
0.489
AAI68534
Xenopus tropicalis
AAI68534
N
0.488
ENSCJAG00000014197
Callithrix jacchus
ENSCJAG00000014197
N
0.487
ENSCJAG00000014991
Callithrix jacchus
ENSCJAG00000014991
N
0.487
ENSOCUG00000016030
Oryctolagus cuniculus
ENSOCUG00000016030
N
0.486
ENSCJAG00000007419
Callithrix jacchus
ENSCJAG00000007419
N
0.485
ENSAMXG00000014031
Astyanax mexicanus
ENSAMXG00000014031
N
0.481
ENSCJAG00000010744
Callithrix jacchus
ENSCJAG00000010744
N
0.481
ENSMPUG00000020113
Mustela putorius furo
ENSMPUG00000020113
N
0.481
ENSOGAG00000010941
Otolemur garnettii
ENSOGAG00000010941
N
0.479
ENSOGAG00000032325
Otolemur garnettii
ENSOGAG00000032325
N
0.479
ENSLAFG00000030388
Loxodonta africana
ENSLAFG00000030388
N
0.477
ENSMEUG00000016024
Macropus eugenii
ENSMEUG00000016024
N
0.475
ENSPANG00000023341
Papio anubis
ENSPANG00000023341
N
0.475
ENSOGAG00000031959
Otolemur garnettii
ENSOGAG00000031959
N
0.473
ENSTBEG00000015758
Tupaia belangeri
ENSTBEG00000015758
N
0.472
ENSDNOG00000041663
Dasypus novemcinctus
ENSDNOG00000041663
N
0.471
CapteG158220
Capitella teleta
CapteG158220
N
0.470
ENSTSYG00000012587
Tarsius syrichta
ENSTSYG00000012587
N
0.468
ENSAMEG00000011652
Ailuropoda melanoleuca
ENSAMEG00000011652
N
0.467
ENSCSAG00000015385
Chlorocebus sabaeus
ENSCSAG00000015385
N
0.467
ENSOGAG00000029272
Otolemur garnettii
ENSOGAG00000029272
N
0.467
SMAR013695
Strigamia maritima
SMAR013695
N
0.467
ENSOGAG00000027183
Otolemur garnettii
ENSOGAG00000027183
N
0.465
SMU15027649
Schmidtea mediterranea
SMU15027649
N
0.465
AABR07060165.1
Rattus norvegicus
ENSRNOG00000048544
N
0.463
Sakowv30042012m.g
Saccoglossus kowalevskii
Sakowv30042012m.g
N
0.458
ENSBTAG00000005098
Bos taurus
ENSBTAG00000005098
N
0.456
ENSCJAG00000005187
Callithrix jacchus
ENSCJAG00000005187
I
0.456
ENSBTAP00000049034-D1
Bos grunniens
ENSBTAP00000049034-D1
N
0.456
ENSCJAG00000011146
Callithrix jacchus
ENSCJAG00000011146
N
0.455
ENSOGAG00000024497
Otolemur garnettii
ENSOGAG00000024497
N
0.454
HelroG157726
Helobdella robusta
HelroG157726
N
0.453
LotgiG200052
Lottia gigantea
LotgiG200052
N
0.452
NV15664
Nasonia vitripennis
NV15664
N
0.452
ACYPI007949
Acyrthosiphon pisum
ACYPI007949
N
0.451
ENSCSAG00000010707
Chlorocebus sabaeus
ENSCSAG00000010707
N
0.450
Dsp1
Drosophila melanogaster
FBgn0011764
N
0.450
GA11488
Drosophila pseudoobscura
FBgn0071539
N
0.450
GF19115
Drosophila ananassae
FBgn0096126
N
0.450
GG17955
Drosophila erecta
FBgn0110175
N
0.450
GH12282
Drosophila grimshawi
FBgn0119761
N
0.450
GI10980
Drosophila mojavensis
FBgn0133743
N
0.450
GD17278
Drosophila simulans
FBgn0188840
N
0.450
GJ19445
Drosophila virilis
FBgn0206588
N
0.450
GK25058
Drosophila willistoni
FBgn0227017
N
0.450
GE17263
Drosophila yakuba
FBgn0234741
N
0.450
LCUP007363
Lucilia cuprina
LCUP007363
N
0.450
ISCW017350
Ixodes scapularis
ISCW017350
N
0.448
ECANG7_07075
Echinococcus canadensis
ECANG7_07075
N
0.447
EmuJ_000941400
Echinococcus multilocularis
EmuJ_000941400
N
0.447
MCOS_0000588101
Mesocestoides corti
MCOS_0000588101
N
0.447
ENSCJAG00000007594
Callithrix jacchus
ENSCJAG00000007594
N
0.446
ENSOARG00000019147
Ovis aries
ENSOARG00000019147
N
0.446
ENSPANG00000025478
Papio anubis
ENSPANG00000025478
N
0.446
ENSCJAG00000003900
Callithrix jacchus
ENSCJAG00000003900
N
0.444
ENSCJAG00000017053
Callithrix jacchus
ENSCJAG00000017053
N
0.440
ENSETEG00000013458
Echinops telfairi
ENSETEG00000013458
N
0.439
ENSOGAG00000033253
Otolemur garnettii
ENSOGAG00000033253
N
0.439
HMEL007340
Heliconius melpomene
HMEL007340
N
0.437
HmN_000761000
Hymenolepis microstoma
HmN_000761000
N
0.437
DAPPUDRAFT_306496
Daphnia pulex
DAPPUDRAFT_306496
N
0.436
ENSMMUG00000010106
Macaca mulatta
ENSMMUG00000010106
I
0.436
AAEL011380
Aedes aegypti
AAEL011380
N
0.435
ACEP16613
Atta cephalotes
ACEP16613
N
0.435
ADAC001494
Anopheles darlingi
ADAC001494
N
0.435
AGAP000005
Anopheles gambiae
AGAP000005
N
0.435
SINV22586
Solenopsis invicta
SINV22586
N
0.435
Cflo_05895--XP_001121384.1_APIME
Camponotus floridanus
Cflo_05895--XP_001121384.1_APIME
N
0.435
Hsal_13110--XP_001121384.1_APIME
Harpegnathos saltator
Hsal_13110--XP_001121384.1_APIME
N
0.435
AALB006743
Anopheles albimanus
AALB006743
N
0.435
AARA010318
Anopheles arabiensis
AARA010318
N
0.435
AATE018776
Anopheles atroparvus
AATE018776
N
0.435
ACUA021022
Anopheles culicifacies
ACUA021022
N
0.435
ADIR011701
Anopheles dirus
ADIR011701
N
0.435
AEPI002924
Anopheles epiroticus
AEPI002924
N
0.435
AFAF003948
Anopheles farauti
AFAF003948
N
0.435
AFUN010134
Anopheles funestus
AFUN010134
N
0.435
AMAM015540
Anopheles maculatus
AMAM015540
N
0.435
AMEC021909
Anopheles melas
AMEC021909
N
0.435
AMEM017336
Anopheles merus
AMEM017336
N
0.435
AMIN005344
Anopheles minimus
AMIN005344
N
0.435
ASIS000124
Anopheles sinensis
ASIS000124
N
0.435
MDOA008812
Musca domestica
MDOA008812
N
0.435
BGIBMGA001132
Bombyx mori
BGIBMGA001132
N
0.434
HMGB1
Gorilla gorilla
ENSGGOG00000026606
N
0.434
ENSOGAG00000033550
Otolemur garnettii
ENSOGAG00000033550
N
0.434
ENSPANG00000020000
Papio anubis
ENSPANG00000020000
N
0.434
EmuJ_001049000
Echinococcus multilocularis
EmuJ_001049000
N
0.434
MCOS_0000526101
Mesocestoides corti
MCOS_0000526101
N
0.434
TsM_000115400
Taenia solium
TsM_000115400
N
0.434
DAPPUDRAFT_232871
Daphnia pulex
DAPPUDRAFT_232871
N
0.433
ENSPPYG00000020229
Pongo abelii
ENSPPYG00000020229
N
0.433
ENSGGOG00000026945
Gorilla gorilla
ENSGGOG00000026945
N
0.432
ENSDNOG00000042649
Dasypus novemcinctus
ENSDNOG00000042649
N
0.431
ENSCJAG00000033913
Callithrix jacchus
ENSCJAG00000033913
N
0.430
HelroG157878
Helobdella robusta
HelroG157878
N
0.430
TASK_0000795701
Taenia asiatica
TASK_0000795701
N
0.430
TsM_000746700
Taenia solium
TsM_000746700
N
0.430
Smp_000980
Schistosoma mansoni
Smp_000980
N
0.429
SCUD_0000020101
Schistosoma curassoni
SCUD_0000020101
N
0.429
SMTD_0001194601
Schistosoma mattheei
SMTD_0001194601
N
0.429
SROB_0000153901
Schistosoma rodhaini
SROB_0000153901
N
0.429
AATE010886
Anopheles atroparvus
AATE010886
N
0.428
ASIS009950
Anopheles sinensis
ASIS009950
N
0.428
ENSGGOG00000023265
Gorilla gorilla
ENSGGOG00000023265
N
0.427
ENSMMUG00000018606
Macaca mulatta
ENSMMUG00000018606
N
0.427
ENSOGAG00000006589
Otolemur garnettii
ENSOGAG00000006589
N
0.426
T265_12733
Opisthorchis viverrini
T265_12733
N
0.425
ENSBTAG00000015315
Bos taurus
ENSBTAG00000015315
N
0.424
SPU_005572
Strongylocentrotus purpuratus
SPU_005572
N
0.424
ENSBTAP00000052990-D1
Bos grunniens
ENSBTAP00000052990-D1
N
0.424
Aqu1.227714
Amphimedon queenslandica
Aqu1.227714
N
0.423
LOC681067
Rattus norvegicus
ENSRNOG00000057013
N
0.422
LOC691030
Rattus norvegicus
ENSRNOG00000057926
N
0.422
SMU15030256
Schmidtea mediterranea
SMU15030256
N
0.422
PXEA_0002175501
Protopolystoma xenopodis
PXEA_0002175501
N
0.422
TTAC_0000939701
Hydatigera taeniaeformis
TTAC_0000939701
N
0.422
ENSTBEG00000005706
Tupaia belangeri
ENSTBEG00000005706
N
0.421
ENSTBEG00000013375
Tupaia belangeri
ENSTBEG00000013375
N
0.421
CpipJ_CPIJ014043
Culex pipiens
CpipJ_CPIJ014043
N
0.420
CPIJ014043
Culex quinquefasciatus
CPIJ014043
N
0.420
LDEC006842
Leptinotarsa decemlineata
LDEC006842
N
0.419
HDID_0000237901
Hymenolepis diminuta
HDID_0000237901
N
0.419
HmN_000466000
Hymenolepis microstoma
HmN_000466000
N
0.419
HNAJ_0001249801
Hymenolepis nana
HNAJ_0001249801
N
0.419
HNAJ_0000227501
Hymenolepis nana
HNAJ_0000227501
N
0.418
LOC103694516
Rattus norvegicus
ENSRNOG00000049646
N
0.417
RGD1561558
Rattus norvegicus
ENSRNOG00000053609
N
0.417
RGD1566225
Rattus norvegicus
ENSRNOG00000055742
N
0.417
RGD1560585
Rattus norvegicus
ENSRNOG00000060534
N
0.417
LOC108349258
Rattus norvegicus
ENSRNOG00000047496
N
0.415
LOC103694517
Rattus norvegicus
ENSRNOG00000052269
N
0.415