CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMRZ_0001007401
(
Schistosoma margrebowiei
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SMRZ_0001007401
T336936_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMRZ_0001007401-mRNA-1
Sox
47
95
IGYSQFFQEIQSAIKYEQPNASFHDICQLVDERWNQLSKIEKKLSEDNK
Links
Other
Sox
family TFs
Other
Schistosoma margrebowiei
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30136.m001048
Ricinus communis
30136.m001048
N
0.000
Aquca_022_00282
Aquilegia coerulea
Aquca_022_00282
I
0.000
Bo3g101690
Brassica oleracea
Bo3g101690
I
0.000
Bra024263
Brassica rapa
Bra024263
I
0.000
Ciclev10001200m.g
Citrus clementina
Ciclev10001200m.g
N
0.000
evm.TU.supercontig_42.145
Carica papaya
evm.TU.supercontig_42.145
I
0.000
GSMUA_Achr11G09000_001
Musa acuminata
GSMUA_Achr11G09000_001
N
0.000
mgf025137m
Mimulus guttatus
mgf025137m
N
0.000
orange1.1g036240m.g
Citrus sinensis
orange1.1g036240m.g
N
0.000
PDK_20s1369501g001
Phoenix dactylifera
PDK_20s1369501g001
N
0.000
Solyc11g005920.1
Solanum lycopersicum
Solyc11g005920.1
N
0.000
TCM_028313
Theobroma cacao
TCM_028313
N
0.000
Thhalv10013785m.g
Eutrema salsugineum
Thhalv10013785m.g
N
0.000