CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000902401
(
Syphacia muris
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SMUV_0000902401
T336970_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000902401-mRNA-1
Sox
628
691
DRATKAAVLYANINYPRLKEDYPLWNDRGKQIHRIWRSLEPGTRQEYVNKARENRASRAKPKKR
Links
Other
Sox
family TFs
Other
Syphacia muris
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000570501
Angiostrongylus cantonensis
ACAC_0000570501
N
0.466
ASIM_0000640901
Anisakis simplex
ASIM_0000640901
N
0.463
ASIM_0000652001
Anisakis simplex
ASIM_0000652001
N
0.463
DME_0001058101
Dracunculus medinensis
DME_0001058101
N
0.489
EVEC_0000369701
Enterobius vermicularis
EVEC_0000369701
N
0.591
GPUH_0002165401
Gongylonema pulchrum
GPUH_0002165401
N
0.486