T (Gallus gallus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSGALG00000011489 T339927_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
T
M05809_2.00 		Homo sapiens
NANGTGYGAHWWNTVRCACCTN
NAGGTGYBANWWDTCRCACNTN		 SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_1 		0.912 0.966
T
M05810_2.00 		Homo sapiens
DTCRCAYVTABGTGYGAH
DTCRCACVTABRTGYGAH		 SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_2 		0.912 0.966
T
M09427_2.00 		Homo sapiens
BYNVCANNNVDGTGWKARDN
NHYTMWCACHBNNNTGBNRV		 Misc
Kulakovskiy et al.(2013)
BRAC_HUMAN.H11MO.0.A 		0.912 0.966
T
M11384_2.00 		Homo sapiens
MKHBTSACACSTAGGTGTGAAATK
MATTTCACACCTASGTGTSAVDMK		 Transfac
Matys et al.(2006)
V$BRACH_01 		0.912 0.966
T
M05811_2.00 		Homo sapiens
NABGTGYGAHWWNTVRCACSTN
NASGTGYBANWWDTCRCACVTN		 SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_1 		0.912 0.966
T
M05812_2.00 		Homo sapiens
DTMRCAYVTABGTGYKAH
DTMRCACVTABRTGYKAH		 SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_2 		0.912 0.966
T
M09431_2.00 		Mus musculus
VVNRAWTTSACASNYHDVTGBNMAN
NTKNVCABHDRNSTGTSAAWTYNBB		 Misc
Kulakovskiy et al.(2013)
BRAC_MOUSE.H11MO.0.B 		0.912 0.960
T
M09651_2.00 		Mus musculus
NYTVDCASNNNNSTGHBARNN
NNYTVDCASNNNNSTGHBARN		 Misc
Heinz et al.(2010)
Mesoendoderm-Brachyury_GSE54963 		0.912 0.960
TBX19
M03562_2.00 		Homo sapiens
NDTVRCACVTANGTGYKANN
NNTMRCACNTABGTGYBAHN		 SELEX
Jolma et al.(2013)
TBX19_1 		0.881 0.852
TBX19
M05803_2.00 		Homo sapiens
NAGGTGYBAHWDTMRCACNTN
NANGTGYKAHWDTVRCACCTN		 SELEX
Yin et al.(2017)
TBX19_eDBD_HT-SELEX 		0.881 0.852
TBX19
M05804_2.00 		Homo sapiens
NANGTGYKAHWDTVRCACSTN
NASGTGYBAHWDTMRCACNTN		 SELEX
Yin et al.(2017)
TBX19_eDBD_Methyl-HT-SELEX 		0.881 0.852
byn
M03984_2.00 		Drosophila melanogaster
ABGTGYGADDD
HHHTCRCACVT		 SELEX
Nitta et al.(2015)
byn_1 		0.815 0.756
byn
M03985_2.00 		Drosophila melanogaster
DNGTGYBAHWWDTVRCACNH
DNGTGYBAHWWDTVRCACNH		 SELEX
Nitta et al.(2015)
byn_2 		0.815 0.756
byn
M03986_2.00 		Drosophila melanogaster
RDGTGYGADNDNDNNNNNNDRDGTGYGADD
HHTCRCACHYHNNNNNNHNHNHTCRCACHY		 SELEX
Nitta et al.(2015)
byn_3 		0.815 0.756
byn
M03987_2.00 		Drosophila melanogaster
NNTMRCAYNWWNRTGYKAHN
NDTMRCAYNWWNRTGYKANN		 SELEX
Nitta et al.(2015)
byn_4 		0.815 0.756
byn
M06453_2.00 		Drosophila melanogaster
ADGTGCDA
THGCACHT		 B1H
Zhu et al.(2011)
byn_FlyReg_FBgn0011723 		0.815 0.756
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000018703 T-box 42 217

Links

Other T-box family TFs
Other Gallus gallus TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_050290 Acremonium chrysogenum ACRE_050290 I
A_00735 Schistosoma haematobium A_00735 I
BBA_08340 Beauveria bassiana BBA_08340 I
BGHDH14_bgh04622 Blumeria graminis BGHDH14_bgh04622 I
CCM_05801 Cordyceps militaris CCM_05801 I
CFIO01_11202 Colletotrichum fioriniae CFIO01_11202 I
CGGC5_11787 Colletotrichum gloeosporioides CGGC5_11787 I
CH063_03691 Colletotrichum higginsianum CH063_03691 I
CHGG_03006 Chaetomium globosum CHGG_03006 I
Cob_05805 Colletotrichum orbiculare Cob_05805 I
CPUR_06147 Claviceps purpurea CPUR_06147 I
CSUB01_11183 Colletotrichum sublineola CSUB01_11183 I
CTHT_0027300 Chaetomium thermophilum CTHT_0027300 I
foxk2 Danio rerio ENSDARG00000030583 I
foxk2 Gasterosteus aculeatus ENSGACG00000014443 I
FOXK2 Gasterosteus aculeatus ENSGACG00000015190 I
ENSGMOG00000001605 Gadus morhua ENSGMOG00000001605 I
ENSGMOG00000002370 Gadus morhua ENSGMOG00000002370 I
ENSONIG00000003229 Oreochromis niloticus ENSONIG00000003229 I
ENSONIG00000009564 Oreochromis niloticus ENSONIG00000009564 I
ENSONIG00000019520 Oreochromis niloticus ENSONIG00000019520 I
foxk2 Oryzias latipes ENSORLG00000000973 I
ENSORLG00000012992 Oryzias latipes ENSORLG00000012992 I
ENSPFOG00000004194 Poecilia formosa ENSPFOG00000004194 I
ENSPFOG00000019094 Poecilia formosa ENSPFOG00000019094 I
FOXK2 Tetraodon nigroviridis ENSTNIG00000010237 I
foxk2 Tetraodon nigroviridis ENSTNIG00000011273 I
foxk2 Takifugu rubripes ENSTRUG00000002114 I
FOXK2 Takifugu rubripes ENSTRUG00000003203 I
ENSXMAG00000011644 Xiphophorus maculatus ENSXMAG00000011644 I
estExt_fgenesh1_pg.C_10757 Cryphonectria parasitica estExt_fgenesh1_pg.C_10757 I
estExt_fgenesh1_pm.C_sca_10_chr8_2_00283 Nectria haematococca estExt_fgenesh1_pm.C_sca_10_chr8_2_00283 I
estExt_fgenesh3_pm.C_50535 Neurospora discreta estExt_fgenesh3_pm.C_50535 I
EV44_g2043 Erysiphe necator EV44_g2043 I
F503_05269 Ophiostoma piceae uamh F503_05269 I
fd68A Drosophila melanogaster FBgn0036134 I
GG13935 Drosophila erecta FBgn0106198 I
GH14639 Drosophila grimshawi FBgn0122115 I
GI11623 Drosophila mojavensis FBgn0134383 I
GL22763 Drosophila persimilis FBgn0160354 I
GK20555 Drosophila willistoni FBgn0222552 I
GE20234 Drosophila yakuba FBgn0237554 I
FFUJ_08512 Fusarium fujikuroi FFUJ_08512 I
FGRRES_05388 Fusarium graminearum FGRRES_05388 I
FOXG_09518 Fusarium oxysporum FOXG_09518 I
FPSE_09301 Fusarium pseudograminearum FPSE_09301 I
FVEG_07145 Fusarium verticillioides FVEG_07145 I
GB52677 Apis mellifera GB52677 I
GGTG_09531 Gaeumannomyces graminis GGTG_09531 I
GLRG_08404 Colletotrichum graminicola GLRG_08404 I
HelroG74778 Helobdella robusta HelroG74778 I
HMPREF1624_03038 Sporothrix schenckii HMPREF1624_03038 I
ISCW002976 Ixodes scapularis ISCW002976 I
L798_01624 Zootermopsis nevadensis L798_01624 I
LCUP004460 Lucilia cuprina LCUP004460 I
LOAG_18033 Loa loa LOAG_18033 I
LotgiG106315 Lottia gigantea LotgiG106315 I
M7I_6126 Glarea lozoyensis M7I_6126 I
MAC_06478 Metarhizium acridum MAC_06478 I
MAJ_03634 Metarhizium majus MAJ_03634 I
MAM_01651 Metarhizium album MAM_01651 I
MANI_018274 Metarhizium anisopliae MANI_018274 I
MAPG_02573 Magnaporthe poae MAPG_02573 I
MBR_07520 Metarhizium brunneum MBR_07520 I
MDOA009504 Musca domestica MDOA009504 I
MGG_06258 Magnaporthe oryzae MGG_06258 I
MGU_03813 Metarhizium guizhouense MGU_03813 I
MYCTH_2304475 Myceliophthora thermophila MYCTH_2304475 I
NCU00019 Neurospora crassa NCU00019 D
nDi.2.2.2.g09096 Dirofilaria immitis nDi.2.2.2.g09096 I
nDi.2.2.2.g09529 Dirofilaria immitis nDi.2.2.2.g09529 I
NechaG105094 Fusarium solani NechaG105094 I
NEUTE1DRAFT_129588 Neurospora tetrasperma NEUTE1DRAFT_129588 I
nLs.2.1.2.g01892 Litomosoides sigmodontis nLs.2.1.2.g01892 I
nOo.2.0.1.g03356 Onchocerca ochengi nOo.2.0.1.g03356 I
OCS_06320 Ophiocordyceps sinensis OCS_06320 I
OIDMADRAFT_176187 Oidiodendron maius OIDMADRAFT_176187 I
PFICI_05264 Pestalotiopsis fici PFICI_05264 I
PODANS_7_5690 Podospora anserina PODANS_7_5690 I
S40285_00418 Stachybotrys chlorohalonata S40285_00418 I
S40288_00189 Stachybotrys chartarum S40288_00189 I
SAPIO_CDS5401 Scedosporium apiospermum SAPIO_CDS5401 I
SCUD_0002144401 Schistosoma curassoni SCUD_0002144401 I
SMAC_00110 Sordaria macrospora SMAC_00110 I
Smp_145650 Schistosoma mansoni Smp_145650 I
SMRZ_0002168001 Schistosoma margrebowiei SMRZ_0002168001 I
SMTD_0000908801 Schistosoma mattheei SMTD_0000908801 I
SPBR_01352 Sporothrix brasiliensis SPBR_01352 I
SPU_025010 Strongylocentrotus purpuratus SPU_025010 D
SROB_0001634001 Schistosoma rodhaini SROB_0001634001 I
tetur27g00040 Tetranychus urticae tetur27g00040 I
THITE_2119283 Thielavia terrestris THITE_2119283 I
TriadG21017 Trichoplax adhaerens TriadG21017 I
TRIATDRAFT_145960 Trichoderma atroviride TRIATDRAFT_145960 I
TRIREDRAFT_70517 Trichoderma reesei TRIREDRAFT_70517 I
TRIVIDRAFT_51092 Trichoderma virens TRIVIDRAFT_51092 I
UCREL1_2890 Eutypa lata UCREL1_2890 I
UV8b_1686 Ustilaginoidea virens UV8b_1686 I
VDAG_06619 Verticillium dahliae VDAG_06619 I
VHEMI01479 Torrubiella hemipterigena VHEMI01479 I
X797_003372 Metarhizium robertsii X797_003372 I
XP_002157478.1 Hydra magnipapillata XP_002157478.1 I