CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TBX19
(
Homo sapiens
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSG00000143178
T339894_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
This gene is a member of a phylogenetically conserved family of genes that share a common DNA-binding domain, the T-box. T-box genes encode transcription factors involved in the regulation of developmental processes. Mutations in this gene were found in patients with isolated deficiency of pituitary POMC-derived ACTH, suggesting an essential role for this gene in differentiation of the pituitary POMC lineage. ACTH deficiency is characterized by adrenal insufficiency symptoms such as weight loss, lack of appetite (anorexia), weakness, nausea, vomiting, and low blood pressure. [provided by RefSeq, Jul 2008]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TBX19
M03562_2.00
Homo sapiens
NDTVRCACVTANGTGYKANN
NNTMRCACNTABGTGYBAHN
SELEX
Jolma et al.(2013)
TBX19_1
(Direct)
(Direct)
TBX19
M05803_2.00
Homo sapiens
NAGGTGYBAHWDTMRCACNTN
NANGTGYKAHWDTVRCACCTN
SELEX
Yin et al.(2017)
TBX19_eDBD_HT-SELEX
(Direct)
(Direct)
TBX19
M05804_2.00
Homo sapiens
NANGTGYKAHWDTVRCACSTN
NASGTGYBAHWDTMRCACNTN
SELEX
Yin et al.(2017)
TBX19_eDBD_Methyl-HT-SELEX
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
T
M05809_2.00
Homo sapiens
NANGTGYGAHWWNTVRCACCTN
NAGGTGYBANWWDTCRCACNTN
SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_1
0.876
0.835
T
M05810_2.00
Homo sapiens
DTCRCAYVTABGTGYGAH
DTCRCACVTABRTGYGAH
SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_2
0.876
0.835
T
M09427_2.00
Homo sapiens
BYNVCANNNVDGTGWKARDN
NHYTMWCACHBNNNTGBNRV
Misc
Kulakovskiy et al.(2013)
BRAC_HUMAN.H11MO.0.A
0.876
0.835
T
M09431_2.00
Mus musculus
VVNRAWTTSACASNYHDVTGBNMAN
NTKNVCABHDRNSTGTSAAWTYNBB
Misc
Kulakovskiy et al.(2013)
BRAC_MOUSE.H11MO.0.B
0.876
0.835
T
M09651_2.00
Mus musculus
NYTVDCASNNNNSTGHBARNN
NNYTVDCASNNNNSTGHBARN
Misc
Heinz et al.(2010)
Mesoendoderm-Brachyury_GSE54963
0.876
0.835
T
M11384_2.00
Homo sapiens
MKHBTSACACSTAGGTGTGAAATK
MATTTCACACCTASGTGTSAVDMK
Transfac
Matys et al.(2006)
V$BRACH_01
0.876
0.835
T
M05811_2.00
Homo sapiens
NABGTGYGAHWWNTVRCACSTN
NASGTGYBANWWDTCRCACVTN
SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_1
0.876
0.835
T
M05812_2.00
Homo sapiens
DTMRCAYVTABGTGYKAH
DTMRCACVTABRTGYKAH
SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_2
0.876
0.835
byn
M03984_2.00
Drosophila melanogaster
ABGTGYGADDD
HHHTCRCACVT
SELEX
Nitta et al.(2015)
byn_1
0.816
0.761
byn
M03985_2.00
Drosophila melanogaster
DNGTGYBAHWWDTVRCACNH
DNGTGYBAHWWDTVRCACNH
SELEX
Nitta et al.(2015)
byn_2
0.816
0.761
byn
M03986_2.00
Drosophila melanogaster
RDGTGYGADNDNDNNNNNNDRDGTGYGADD
HHTCRCACHYHNNNNNNHNHNHTCRCACHY
SELEX
Nitta et al.(2015)
byn_3
0.816
0.761
byn
M03987_2.00
Drosophila melanogaster
NNTMRCAYNWWNRTGYKAHN
NDTMRCAYNWWNRTGYKANN
SELEX
Nitta et al.(2015)
byn_4
0.816
0.761
byn
M06453_2.00
Drosophila melanogaster
ADGTGCDA
THGCACHT
B1H
Zhu et al.(2011)
byn_FlyReg_FBgn0011723
0.816
0.761
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000356795
T-box
43
218
IILEDAPLWQRFKEVTNEMIVTKNGRRMFPVLKISVTGLDPNAMYSLLLDFVPTDSHRWKYVNGEWVPAGKPEVSSHSCVYIHPDSPNFGAHWMKAPISFSKVKLTNKLNGGGQIMLNSLHKYEPQVHIVRVGSAHRMVTNCSFPETQFIAVTAYQNEEITALKIKYNPFAKAFLD
ENSP00000390731
T-box
10
51
YRRQRVLFAHVYPTFTNTSCLCKCKITALKIKYNPFAKAFLD
ENSP00000397540
T-box
1
151
XRMFPVLKISVTGLDPNAMYSLLLDFVPTDSHRWKYVNGEWVPAGKPEVSSHSCVYIHPDSPNFGAHWMKAPISFSKVKLTNKLNGGGQIMLNSLHKYEPQVHIVRVGSAHRMVTNCSFPETQFIAVTAYQNEEITALKIKYNPFAKAFLD
Links
Other
T-box
family TFs
Other
Homo sapiens
TFs
179 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSSTOG00000019913
Ictidomys tridecemlineatus
ENSSTOG00000019913
I
0.920
ENSNLEG00000014917
Nomascus leucogenys
ENSNLEG00000014917
I
0.920
TBX19
Equus caballus
ENSECAG00000010186
I
0.920
SFT2D2
Macaca mulatta
ENSMMUG00000005283
I
0.920
TBX19
Pan troglodytes
ENSPTRG00000001647
I
0.920
TBX19
Gorilla gorilla
ENSGGOG00000001338
I
0.920
ENSP00000356795
Macaca fascicularis
ENSP00000356795
I
0.920
ENSCSAG00000011055
Chlorocebus sabaeus
ENSCSAG00000011055
I
0.920
TBX19
Oryctolagus cuniculus
ENSOCUG00000014555
I
0.912
ENSMPUG00000000522
Mustela putorius furo
ENSMPUG00000000522
I
0.912
TBX19
Canis familiaris
ENSCAFG00000015268
I
0.912
TBX19
Cavia porcellus
ENSCPOG00000012456
I
0.912
TBX19
Myotis lucifugus
ENSMLUG00000011933
I
0.912
TBX19
Vicugna pacos
ENSVPAG00000000446
I
0.912
Myotis_brandtii_TBX19_10024384
Myotis brandtii
Myotis_brandtii_TBX19_10024384
I
0.912
TBX19
Otolemur garnettii
ENSOGAG00000004458
I
0.912
TBX19
Callithrix jacchus
ENSCJAG00000016812
I
0.912
TBX19
Felis catus
ENSFCAG00000015047
I
0.912
Tbx19
Mus musculus
ENSMUSG00000026572
I
0.912
TBX19
Sus scrofa
ENSSSCG00000006299
I
0.912
ENSAMEG00000004326
Ailuropoda melanoleuca
ENSAMEG00000004326
I
0.909
TBX19
Ochotona princeps
ENSOPRG00000016564
I
0.908
TBX19
Microcebus murinus
ENSMICG00000007817
I
0.905
TBX19
Loxodonta africana
ENSLAFG00000011227
I
0.905
ENSOARG00000012617
Ovis aries
ENSOARG00000012617
I
0.903
TBX19
Bos taurus
ENSBTAG00000002952
I
0.903
ENSP00000356795-D1
Bos grunniens
ENSP00000356795-D1
I
0.903
ENSSHAG00000018940
Sarcophilus harrisii
ENSSHAG00000018940
I
0.902
TBX19
Choloepus hoffmanni
ENSCHOG00000010387
I
0.893
TBX19
Gallus gallus
ENSGALG00000015244
I
0.891
Tbx19
Dipodomys ordii
ENSDORG00000014860
I
0.889
Aan_R012309
Calypte anna
Aan_R012309
I
0.889
Cmyd_10020966
Chelonia mydas
Cmyd_10020966
I
0.884
t2
Xenopus tropicalis
XB-GENE-5981736
I
0.882
ENSFALG00000005706
Ficedula albicollis
ENSFALG00000005706
I
0.882
Pvit_02210
Pogona vitticeps
Pvit_02210
I
0.882
TBX19
Taeniopygia guttata
ENSTGUG00000013434
I
0.882
Alligator_sinensis_CCG010779.1
Alligator sinensis
Alligator_sinensis_CCG010779.1
I
0.882
Brh_R012030
Buceros rhinoceros
Brh_R012030
I
0.882
ENSAPLG00000010506
Anas platyrhynchos
ENSAPLG00000010506
I
0.882
TBX19
Anolis carolinensis
ENSACAG00000010693
I
0.882
Afo_R013116
Aptenodytes forsteri
Afo_R013116
I
0.882
Gfo_R000170
Geospiza fortis
Gfo_R000170
I
0.882
T
Taeniopygia guttata
ENSTGUG00000009448
I
0.881
T
Canis familiaris
ENSCAFG00000000807
I
0.881
T
Ornithorhynchus anatinus
ENSOANG00000012289
I
0.881
Pvit_04554
Pogona vitticeps
Pvit_04554
I
0.881
T
Gallus gallus
ENSGALG00000011489
I
0.881
Ogr19099
Ophisaurus gracilis
Ogr19099
I
0.881
T
Anolis carolinensis
ENSACAG00000003467
I
0.881
TBX19
Monodelphis domestica
ENSMODG00000002921
I
0.880
ENSOARG00000004863
Ovis aries
ENSOARG00000004863
I
0.876
ENSSTOG00000028238
Ictidomys tridecemlineatus
ENSSTOG00000028238
I
0.876
ENSNLEG00000011552
Nomascus leucogenys
ENSNLEG00000011552
I
0.876
T
Tursiops truncatus
ENSTTRG00000016665
I
0.876
Cmyd_10017804
Chelonia mydas
Cmyd_10017804
I
0.876
ENSMMUP00000022430
Macaca fascicularis
ENSMMUP00000022430
I
0.876
ENSSHAG00000018904
Sarcophilus harrisii
ENSSHAG00000018904
I
0.876
T
Pan troglodytes
ENSPTRG00000018789
I
0.876
ENSPANG00000005068
Papio anubis
ENSPANG00000005068
I
0.876
ENSPPYG00000017163
Pongo abelii
ENSPPYG00000017163
I
0.876
ENSPSIG00000005649
Pelodiscus sinensis
ENSPSIG00000005649
I
0.876
T
Otolemur garnettii
ENSOGAG00000007863
I
0.876
T
Rattus norvegicus
ENSRNOG00000012229
I
0.876
T
Homo sapiens
ENSG00000164458
D
0.876
T
Loxodonta africana
ENSLAFG00000012505
I
0.876
ENSCSAG00000012200
Chlorocebus sabaeus
ENSCSAG00000012200
I
0.876
T
Gorilla gorilla
ENSGGOG00000007693
I
0.876
T
Mus musculus
ENSMUSG00000062327
D
0.876
T
Cavia porcellus
ENSCPOG00000001358
I
0.876
T
Equus caballus
ENSECAG00000007994
I
0.876
T
Macaca mulatta
ENSMMUG00000017047
I
0.876
T
Monodelphis domestica
ENSMODG00000006318
I
0.876
T
Bos taurus
ENSBTAG00000018681
I
0.876
T
Callithrix jacchus
ENSCJAG00000012508
I
0.876
ENSDNOG00000016178
Dasypus novemcinctus
ENSDNOG00000016178
I
0.876
T
Ochotona princeps
ENSOPRG00000003376
I
0.875
TBX19
Dasypus novemcinctus
ENSDNOG00000015810
I
0.875
ENSPSIG00000015509
Pelodiscus sinensis
ENSPSIG00000015509
I
0.874
t2.S
Xenopus laevis
XB-GENE-5981788
I
0.856
Alligator_sinensis_CCG019781.1
Alligator sinensis
Alligator_sinensis_CCG019781.1
I
0.854
TriadG25521
Trichoplax adhaerens
TriadG25521
I
0.852
ENSLOCG00000010586
Lepisosteus oculatus
ENSLOCG00000010586
I
0.851
tbxt.L
Xenopus laevis
XB-GENE-6255736
I
0.851
tbxt
Xenopus tropicalis
XB-GENE-478789
I
0.851
tbxt.S
Xenopus laevis
XB-GENE-865212
I
0.849
1XBR_A
Xenopus laevis
1XBR_A
I
0.849
ENSLOCG00000016526
Lepisosteus oculatus
ENSLOCG00000016526
I
0.849
1XBR_B
Xenopus laevis
1XBR_B
I
0.849
ENSLACG00000015449
Latimeria chalumnae
ENSLACG00000015449
I
0.849
ENSONIG00000009906
Oreochromis niloticus
ENSONIG00000009906
I
0.849
ENSXMAG00000011123
Xiphophorus maculatus
ENSXMAG00000011123
I
0.849
tb
Danio rerio
ENSDARG00000039806
I
0.847
tb
Oryzias latipes
ENSORLG00000011262
I
0.847
ENSPFOG00000016071
Poecilia formosa
ENSPFOG00000016071
I
0.841
T
Oryctolagus cuniculus
ENSOCUG00000000660
I
0.835
estExt_gwp.C_650221
Branchiostoma floridae
estExt_gwp.C_650221
I
0.831
estExt_GenewiseH_1.C_9340011
Branchiostoma floridae
estExt_GenewiseH_1.C_9340011
I
0.831
estExt_gwp.C_9340008
Branchiostoma floridae
estExt_gwp.C_9340008
I
0.830
estExt_fgenesh2_pg.C_650149
Branchiostoma floridae
estExt_fgenesh2_pg.C_650149
I
0.830
tb
Tetraodon nigroviridis
ENSTNIG00000016613
I
0.829
tb
Takifugu rubripes
ENSTRUG00000011958
I
0.828
tbx19
Danio rerio
ENSDARG00000079187
I
0.824
ENSGMOG00000017391
Gadus morhua
ENSGMOG00000017391
I
0.823
CLEC002870
Cimex lectularius
CLEC002870
I
0.823
RPRC001186
Rhodnius prolixus
RPRC001186
I
0.823
PHUM392580
Pediculus humanus
PHUM392580
I
0.821
MCINX002868
Melitaea cinxia
MCINX002868
I
0.818
BGIBMGA000322
Bombyx mori
BGIBMGA000322
I
0.818
tbx19
Tetraodon nigroviridis
ENSTNIG00000006586
I
0.817
ENSONIG00000008985
Oreochromis niloticus
ENSONIG00000008985
I
0.817
NV14821
Nasonia vitripennis
NV14821
I
0.816
byn
Drosophila melanogaster
FBgn0011723
D
0.816
GF25302
Drosophila ananassae
FBgn0102294
I
0.816
Hsal_03707--XP_396427.2_APIME
Harpegnathos saltator
Hsal_03707--XP_396427.2_APIME
I
0.816
LCUP008716
Lucilia cuprina
LCUP008716
I
0.816
Cflo_04209--XP_396427.2_APIME
Camponotus floridanus
Cflo_04209--XP_396427.2_APIME
I
0.816
MDOA012486
Musca domestica
MDOA012486
I
0.816
GE21864
Drosophila yakuba
FBgn0239106
I
0.816
GA20217
Drosophila pseudoobscura
FBgn0080212
I
0.816
GM25308
Drosophila sechellia
FBgn0180168
I
0.816
GL25108
Drosophila persimilis
FBgn0162695
I
0.816
GH14805
Drosophila grimshawi
FBgn0122281
I
0.816
GI11508
Drosophila mojavensis
FBgn0134268
I
0.816
GD14339
Drosophila simulans
FBgn0186024
I
0.816
GK25266
Drosophila willistoni
FBgn0227225
I
0.816
GG15542
Drosophila erecta
FBgn0107790
I
0.816
GJ13700
Drosophila virilis
FBgn0200921
I
0.816
ENSAMXG00000003991
Astyanax mexicanus
ENSAMXG00000003991
I
0.815
TC014076
Tribolium castaneum
TC014076
I
0.813
tbx19
Takifugu rubripes
ENSTRUG00000005718
I
0.812
ENSLACG00000011042
Latimeria chalumnae
ENSLACG00000011042
I
0.812
XP_002164912.1
Hydra magnipapillata
XP_002164912.1
I
0.810
ML174736a
Mnemiopsis leidyi
ML174736a
I
0.809
LotgiG154800
Lottia gigantea
LotgiG154800
I
0.806
ta
Takifugu rubripes
ENSTRUG00000012130
I
0.803
CPIJ011372
Culex quinquefasciatus
CPIJ011372
I
0.802
CpipJ_CPIJ011372
Culex pipiens
CpipJ_CPIJ011372
I
0.802
CGI_10018059
Crassostrea gigas
CGI_10018059
I
0.801
AALB003755
Anopheles albimanus
AALB003755
I
0.799
ENSONIG00000007611
Oreochromis niloticus
ENSONIG00000007611
I
0.799
AARA000721
Anopheles arabiensis
AARA000721
I
0.799
AAEL011926
Aedes aegypti
AAEL011926
I
0.799
ENSPFOG00000002451
Poecilia formosa
ENSPFOG00000002451
I
0.799
me-t
Oryzias latipes
ENSORLG00000014067
I
0.799
ENSGMOG00000018941
Gadus morhua
ENSGMOG00000018941
I
0.799
ACUA027826
Anopheles culicifacies
ACUA027826
I
0.799
AQUA010101
Anopheles quadriannulatus
AQUA010101
I
0.799
ASIS006984
Anopheles sinensis
ASIS006984
I
0.799
ASTEI05115
Anopheles stephensi
ASTEI05115
I
0.799
AMIN008605
Anopheles minimus
AMIN008605
I
0.799
AFUN010277
Anopheles funestus
AFUN010277
I
0.799
ADIR001942
Anopheles dirus
ADIR001942
I
0.799
AEPI011219
Anopheles epiroticus
AEPI011219
I
0.799
ACOM032190
Anopheles coluzzii
ACOM032190
I
0.799
ta
Gasterosteus aculeatus
ENSGACG00000007637
I
0.799
ADAC000433
Anopheles darlingi
ADAC000433
I
0.799
ENSXMAG00000012033
Xiphophorus maculatus
ENSXMAG00000012033
I
0.799
Alligator_sinensis_CCG010961.2
Alligator sinensis
Alligator_sinensis_CCG010961.2
I
0.799
ta
Danio rerio
ENSDARG00000101576
I
0.799
AGAP011927
Anopheles gambiae
AGAP011927
I
0.799
tb
Gasterosteus aculeatus
ENSGACG00000005258
I
0.798
AMEC020399
Anopheles melas
AMEC020399
I
0.798
Gfo_R011100
Geospiza fortis
Gfo_R011100
N
0.798
ENSAMXG00000013638
Astyanax mexicanus
ENSAMXG00000013638
I
0.796
ENSLOCG00000003838
Lepisosteus oculatus
ENSLOCG00000003838
I
0.796
ta
Tetraodon nigroviridis
ENSTNIG00000005634
I
0.796
ENSPFOG00000006034
Poecilia formosa
ENSPFOG00000006034
I
0.792
ENSXMAG00000006226
Xiphophorus maculatus
ENSXMAG00000006226
I
0.791
Sakowv30011577m.g
Saccoglossus kowalevskii
Sakowv30011577m.g
I
0.785
ENSCSAVG00000002247
Ciona savignyi
ENSCSAVG00000002247
I
0.783
brachyury
Ciona intestinalis
ENSCING00000000810
I
0.778
ENSAMEG00000009278
Ailuropoda melanoleuca
ENSAMEG00000009278
I
0.774
GB51013
Apis mellifera
GB51013
I
0.765
SNAPOd2T00000418001
Oikopleura dioica
SNAPOd2T00000418001
I
0.762
DAPPUDRAFT_44582
Daphnia pulex
DAPPUDRAFT_44582
I
0.757
XP_002154016.1
Hydra magnipapillata
XP_002154016.1
I
0.747
SMAR005933
Strigamia maritima
SMAR005933
I
0.747
T
Meleagris gallopavo
ENSMGAG00000012328
N
0.744