CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMIN000536
(
Anopheles minimus
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
AMIN000536
T341479_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
org-1
M03988_2.00
Drosophila melanogaster
DRGTGTBAD
HTVACACYH
SELEX
Nitta et al.(2015)
org-1_1
0.753
0.758
org-1
M03989_2.00
Drosophila melanogaster
TRACACYTARGTGTGA
TCACACYTARGTGTYA
SELEX
Nitta et al.(2015)
org-1_2
0.753
0.758
Tbx1
M00832_2.00
Mus musculus
NRGTGTGAANN
NNTTCACACYN
PBM
Weirauch et al.(2013)
pTH3822
0.746
0.714
TBX1
M03570_2.00
Homo sapiens
ARGTGTKAAAWHARGTGTGA
TCACACYTDWTTTMACACYT
SELEX
Jolma et al.(2013)
TBX1_1
0.746
0.714
TBX1
M03571_2.00
Homo sapiens
AGGTGTGAWWTTCACACCT
AGGTGTGAAWWTCACACCT
SELEX
Jolma et al.(2013)
TBX1_2
0.746
0.714
TBX1
M03572_2.00
Homo sapiens
AGGTGTGA
TCACACCT
SELEX
Jolma et al.(2013)
TBX1_3
0.746
0.714
TBX1
M03573_2.00
Homo sapiens
YYTCACACMTYWRAGGTGTGAAA
TTTCACACCTYWRAKGTGTGARR
SELEX
Jolma et al.(2013)
TBX1_4
0.746
0.714
TBX1
M03574_2.00
Homo sapiens
YTCACACCTDKAGGTGTGAA
TTCACACCTMHAGGTGTGAR
SELEX
Jolma et al.(2013)
TBX1_5
0.746
0.714
TBX1
M05821_2.00
Homo sapiens
BDRGGTGTGARV
BYTCACACCYHV
SELEX
Yin et al.(2017)
TBX1_eDBD_HT-SELEX
0.746
0.714
Tbx1
M11386_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX1_07
0.746
0.714
TBX1
M05822_2.00
Homo sapiens
DNWGGTGTGARN
NYTCACACCWNH
SELEX
Yin et al.(2017)
TBX1_eDBD_Methyl-HT-SELEX
0.746
0.714
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMIN000536-PA
T-box
200
385
VVLEGKHLWDKFHEQGTEMIVTKAGRRMFPTFQVKVVGLELAAEYLMIMDFVPLDDKRYRYAFHTSSWVVAGKADPISPPRISVHPDSPATGATWMKQTISFDKLKLTNNQLDDNGHIILNSMHRYQPRLHVCYFTRNGVKDEKDTLTHRTFVFPETSFTAVTAYQNQRVTQLKIVSNPFAKGFRD
Links
Other
T-box
family TFs
Other
Anopheles minimus
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30174.m008651
Ricinus communis
30174.m008651
I
BGIOSGA000583
Oryza indica
BGIOSGA000583
N
BGIOSGA004701
Oryza indica
BGIOSGA004701
N
BGIOSGA004703
Oryza indica
BGIOSGA004703
I
WRKY51
Oryza indica
BGIOSGA009380
I
BGIOSGA012523
Oryza indica
BGIOSGA012523
N
BGIOSGA012525
Oryza indica
BGIOSGA012525
N
BGIOSGA017556
Oryza indica
BGIOSGA017556
I
BGIOSGA034616
Oryza indica
BGIOSGA034616
N
BGIOSGA036756
Oryza indica
BGIOSGA036756
N
BGIOSGA036760
Oryza indica
BGIOSGA036760
N
BRADI1G63910
Brachypodium distachyon
BRADI1G63910
N
BRADI2G53495
Brachypodium distachyon
BRADI2G53495
I
BRADI2G53510
Brachypodium distachyon
BRADI2G53510
I
Cla010134
Citrullus lanatus
Cla010134
I
Cucsa.143830
Cucumis sativus
Cucsa.143830
I
Cucsa.311060
Cucumis sativus
Cucsa.311060
I
F775_02479
Aegilops tauschii
F775_02479
N
F775_23182
Aegilops tauschii
F775_23182
I
F775_23296
Aegilops tauschii
F775_23296
N
F775_31089
Aegilops tauschii
F775_31089
N
F775_31341
Aegilops tauschii
F775_31341
I
GLYMA14G36446
Glycine max
GLYMA14G36446
I
GRMZM2G005207
Zea mays
GRMZM2G005207
I
GRMZM2G029292
Zea mays
GRMZM2G029292
I
GRMZM2G030272
Zea mays
GRMZM2G030272
N
GRMZM2G060918
Zea mays
GRMZM2G060918
N
GRMZM2G063216
Zea mays
GRMZM2G063216
N
GRMZM2G065290
Zea mays
GRMZM2G065290
I
GRMZM2G099593
Zea mays
GRMZM2G099593
N
GRMZM2G158328
Zea mays
GRMZM2G158328
I
GSMUA_Achr5G08580_001
Musa acuminata
GSMUA_Achr5G08580_001
I
GSMUA_Achr7G22020_001
Musa acuminata
GSMUA_Achr7G22020_001
I
GSMUA_Achr8G25110_001
Musa acuminata
GSMUA_Achr8G25110_001
I
GSMUA_Achr9G04830_001
Musa acuminata
GSMUA_Achr9G04830_001
I
LPERR01G30490
Leersia perrieri
LPERR01G30490
I
LPERR03G13630
Leersia perrieri
LPERR03G13630
N
LPERR04G04290
Leersia perrieri
LPERR04G04290
I
LPERR05G16160
Leersia perrieri
LPERR05G16160
N
LPERR10G04210
Leersia perrieri
LPERR10G04210
I
LPERR11G00940
Leersia perrieri
LPERR11G00940
N
LPERR11G00970
Leersia perrieri
LPERR11G00970
N
LPERR12G01080
Leersia perrieri
LPERR12G01080
N
MDP0000828055
Malus domestica
MDP0000828055
I
MLOC_3853
Hordeum vulgare
MLOC_3853
N
MLOC_57051
Hordeum vulgare
MLOC_57051
I
MLOC_57764
Hordeum vulgare
MLOC_57764
N
OB01G44130
Oryza brachyantha
OB01G44130
I
OB01G44140
Oryza brachyantha
OB01G44140
I
OB03G25300
Oryza brachyantha
OB03G25300
N
OB05G27840
Oryza brachyantha
OB05G27840
N
OB11G10730
Oryza brachyantha
OB11G10730
N
OB11G10760
Oryza brachyantha
OB11G10760
N
OB12G11030
Oryza brachyantha
OB12G11030
N
OB12G11040
Oryza brachyantha
OB12G11040
I
OBART01G35280
Oryza barthii
OBART01G35280
N
OBART01G35310
Oryza barthii
OBART01G35310
I
OBART01G35360
Oryza barthii
OBART01G35360
N
OBART03G15470
Oryza barthii
OBART03G15470
N
OBART04G06440
Oryza barthii
OBART04G06440
I
OBART05G08130
Oryza barthii
OBART05G08130
I
OBART05G20320
Oryza barthii
OBART05G20320
N
OBART05G20330
Oryza barthii
OBART05G20330
I
OBART05G20340
Oryza barthii
OBART05G20340
I
OBART10G05920
Oryza barthii
OBART10G05920
N
OBART11G01070
Oryza barthii
OBART11G01070
N
OBART12G00800
Oryza barthii
OBART12G00800
N
OBART12G00850
Oryza barthii
OBART12G00850
N
OGLUM01G39350
Oryza glumaepatula
OGLUM01G39350
N
OGLUM03G15660
Oryza glumaepatula
OGLUM03G15660
N
OGLUM05G08540
Oryza glumaepatula
OGLUM05G08540
I
OGLUM05G21430
Oryza glumaepatula
OGLUM05G21430
N
OGLUM05G21510
Oryza glumaepatula
OGLUM05G21510
I
OGLUM12G01250
Oryza glumaepatula
OGLUM12G01250
N
OGLUM12G01320
Oryza glumaepatula
OGLUM12G01320
N
OGLUM12G02880
Oryza glumaepatula
OGLUM12G02880
I
OLONG_000628
Oryza longistaminata
OLONG_000628
N
OLONG_001744
Oryza longistaminata
OLONG_001744
N
OLONG_013966
Oryza longistaminata
OLONG_013966
I
OLONG_019907
Oryza longistaminata
OLONG_019907
I
OLONG_022888
Oryza longistaminata
OLONG_022888
N
OLONG_028722
Oryza longistaminata
OLONG_028722
N
OMERI01G32440
Oryza meridionalis
OMERI01G32440
N
OMERI01G32500
Oryza meridionalis
OMERI01G32500
N
OMERI04G05660
Oryza meridionalis
OMERI04G05660
I
OMERI05G18260
Oryza meridionalis
OMERI05G18260
I
OMERI10G04260
Oryza meridionalis
OMERI10G04260
N
OMERI11G01480
Oryza meridionalis
OMERI11G01480
N
OMERI11G01570
Oryza meridionalis
OMERI11G01570
N
OMERI12G00120
Oryza meridionalis
OMERI12G00120
N
ONIVA01G40340
Oryza nivara
ONIVA01G40340
I
ONIVA01G40380
Oryza nivara
ONIVA01G40380
N
ONIVA03G16490
Oryza nivara
ONIVA03G16490
N
ONIVA04G04750
Oryza nivara
ONIVA04G04750
I
ONIVA05G08650
Oryza nivara
ONIVA05G08650
I
ONIVA11G01010
Oryza nivara
ONIVA11G01010
N
ONIVA12G00800
Oryza nivara
ONIVA12G00800
N
OPUNC01G34260
Oryza punctata
OPUNC01G34260
N
OPUNC01G34270
Oryza punctata
OPUNC01G34270
N
OPUNC01G34280
Oryza punctata
OPUNC01G34280
I
OPUNC01G34290
Oryza punctata
OPUNC01G34290
N
OPUNC03G15030
Oryza punctata
OPUNC03G15030
N
OPUNC04G05220
Oryza punctata
OPUNC04G05220
I
OPUNC05G07410
Oryza punctata
OPUNC05G07410
I
OPUNC05G18030
Oryza punctata
OPUNC05G18030
I
OPUNC10G05310
Oryza punctata
OPUNC10G05310
N
OPUNC11G00930
Oryza punctata
OPUNC11G00930
N
OPUNC11G00980
Oryza punctata
OPUNC11G00980
N
OPUNC12G00990
Oryza punctata
OPUNC12G00990
N
ORGLA01G0291600
Oryza glaberrima
ORGLA01G0291600
N
ORGLA01G0291800
Oryza glaberrima
ORGLA01G0291800
I
ORGLA01G0292000
Oryza glaberrima
ORGLA01G0292000
N
ORGLA03G0148400
Oryza glaberrima
ORGLA03G0148400
N
ORGLA04G0048700
Oryza glaberrima
ORGLA04G0048700
I
ORGLA05G0070000
Oryza glaberrima
ORGLA05G0070000
I
ORGLA05G0177300
Oryza glaberrima
ORGLA05G0177300
N
ORGLA05G0177400
Oryza glaberrima
ORGLA05G0177400
I
ORGLA10G0049300
Oryza glaberrima
ORGLA10G0049300
N
ORGLA11G0201600
Oryza glaberrima
ORGLA11G0201600
N
ORGLA12G0007100
Oryza glaberrima
ORGLA12G0007100
N
ORGLA12G0007600
Oryza glaberrima
ORGLA12G0007600
N
ORUFI01G38630
Oryza rufipogon
ORUFI01G38630
N
ORUFI01G38660
Oryza rufipogon
ORUFI01G38660
I
ORUFI01G38680
Oryza rufipogon
ORUFI01G38680
N
ORUFI03G16080
Oryza rufipogon
ORUFI03G16080
N
ORUFI04G07400
Oryza rufipogon
ORUFI04G07400
I
ORUFI05G08750
Oryza rufipogon
ORUFI05G08750
I
ORUFI11G01010
Oryza rufipogon
ORUFI11G01010
N
ORUFI12G01140
Oryza rufipogon
ORUFI12G01140
N
OS01G0820400
Oryza sativa
OS01G0820400
N
OS01G0820700
Oryza sativa
OS01G0820700
I
OS03G0321700
Oryza sativa
OS03G0321700
N
OS11G0117500
Oryza sativa
OS11G0117500
N
OS12G0116700
Oryza sativa
OS12G0116700
N
Pavir.Ca00178
Panicum virgatum
Pavir.Ca00178
N
Pavir.Cb02194
Panicum virgatum
Pavir.Cb02194
I
Pavir.Ea03256
Panicum virgatum
Pavir.Ea03256
N
Pavir.Ea03257
Panicum virgatum
Pavir.Ea03257
I
Pavir.Eb03562
Panicum virgatum
Pavir.Eb03562
I
Pavir.Ga02545
Panicum virgatum
Pavir.Ga02545
N
Pavir.Ha01933
Panicum virgatum
Pavir.Ha01933
I
Pavir.Hb02025
Panicum virgatum
Pavir.Hb02025
N
Pavir.Ib01500
Panicum virgatum
Pavir.Ib01500
N
Pavir.Ib01568
Panicum virgatum
Pavir.Ib01568
I
Pavir.J05812
Panicum virgatum
Pavir.J05812
I
Pavir.J12092
Panicum virgatum
Pavir.J12092
I
Pavir.J31578
Panicum virgatum
Pavir.J31578
N
Pavir.J34713
Panicum virgatum
Pavir.J34713
N
Pavir.J39511
Panicum virgatum
Pavir.J39511
I
PDK_20s1314561g002
Phoenix dactylifera
PDK_20s1314561g002
I
Sb01g036870
Sorghum bicolor
Sb01g036870
N
Sb03g038180
Sorghum bicolor
Sb03g038180
I
Sb03g038200
Sorghum bicolor
Sb03g038200
N
Sb05g001170
Sorghum bicolor
Sb05g001170
N
Sb05g001220
Sorghum bicolor
Sb05g001220
N
Si002121m.g
Setaria italica
Si002121m.g
I
Si003782m.g
Setaria italica
Si003782m.g
N
Si010706m.g
Setaria italica
Si010706m.g
N
Si011007m.g
Setaria italica
Si011007m.g
N
Si012025m.g
Setaria italica
Si012025m.g
I
Si026670m.g
Setaria italica
Si026670m.g
N
Si026831m.g
Setaria italica
Si026831m.g
N
Si027769m.g
Setaria italica
Si027769m.g
N
Si027998m.g
Setaria italica
Si027998m.g
N
Si028270m.g
Setaria italica
Si028270m.g
N
Si039519m.g
Setaria italica
Si039519m.g
N
TCM_006103
Theobroma cacao
TCM_006103
I
Traes_1AL_B24F28600
Triticum aestivum
Traes_1AL_B24F28600
I
Traes_1BL_B4AFDB663
Triticum aestivum
Traes_1BL_B4AFDB663
I
Traes_3AL_2297D6E18
Triticum aestivum
Traes_3AL_2297D6E18
I
Traes_3DL_48F7A19D2
Triticum aestivum
Traes_3DL_48F7A19D2
I
Traes_4AS_70DF607CC
Triticum aestivum
Traes_4AS_70DF607CC
N
Traes_4BL_A8C6FBEB6
Triticum aestivum
Traes_4BL_A8C6FBEB6
N
Traes_4DL_3140A8240
Triticum aestivum
Traes_4DL_3140A8240
N
TRIUR3_06231
Triticum urartu
TRIUR3_06231
N
TRIUR3_26571
Triticum urartu
TRIUR3_26571
N
TRIUR3_34396
Triticum urartu
TRIUR3_34396
I