FPSE_05036 (Fusarium pseudograminearum)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 FPSE_05036 T342557_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.910 0.910
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.910 0.910
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.910 0.910
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.820 0.820
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.820 0.820
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.820 0.820
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.820 0.820
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.820 0.820
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.820 0.820
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.820 0.820
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.820 0.820
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.820 0.820
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.820 0.820
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKJ74788 TBP 78 160
EKJ74788 TBP 168 251

Links

Other TBP family TFs
Other Fusarium pseudograminearum TFs

759 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29610.m000410 Ricinus communis 29610.m000410 I
Aquca_004_00289 Aquilegia coerulea Aquca_004_00289 I
AT3G11280 Arabidopsis thaliana AT3G11280 D
Bo1g141120 Brassica oleracea Bo1g141120 I
Bo5g136680 Brassica oleracea Bo5g136680 I
Bostr.19424s1061 Boechera stricta Bostr.19424s1061 I
Bra034173 Brassica rapa Bra034173 I
Bra034853 Brassica rapa Bra034853 I
Cagra.1655s0043 Capsella grandiflora Cagra.1655s0043 I
Carubv10014411m.g Capsella rubella Carubv10014411m.g I
cassava1257.valid.m1 Manihot esculenta cassava1257.valid.m1 I
cassava26873.m1 Manihot esculenta cassava26873.m1 I
Ca_12513 Cicer arietinum Ca_12513 I
Ciclev10032309m.g Citrus clementina Ciclev10032309m.g I
Cla004397 Citrullus lanatus Cla004397 I
Cucsa.164580 Cucumis sativus Cucsa.164580 I
evm.TU.supercontig_19.216 Carica papaya evm.TU.supercontig_19.216 I
evm.TU.supercontig_19.217 Carica papaya evm.TU.supercontig_19.217 I
fgenesh2_kg.3__1170__AT3G11280.1 Arabidopsis lyrata fgenesh2_kg.3__1170__AT3G11280.1 I
GLYMA02G42140 Glycine max GLYMA02G42140 I
GLYMA14G06750 Glycine max GLYMA14G06750 I
Gorai.012G075600 Gossypium raimondii Gorai.012G075600 I
Lus10009884.g Linum usitatissimum Lus10009884.g I
Lus10014837.g Linum usitatissimum Lus10014837.g I
MDP0000277813 Malus domestica MDP0000277813 I
mgf010347m Mimulus guttatus mgf010347m I
MTR_5g081860 Medicago truncatula MTR_5g081860 I
orange1.1g023196m.g Citrus sinensis orange1.1g023196m.g I
PGSC0003DMG400020730 Solanum tuberosum PGSC0003DMG400020730 I
PGSC0003DMG400027126 Solanum tuberosum PGSC0003DMG400027126 I
PK15104.1 Cannabis sativa PK15104.1 I
Pm018878 Prunus mume Pm018878 I
POPTR_0008s06450 Populus trichocarpa POPTR_0008s06450 I
POPTR_0010s20040 Populus trichocarpa POPTR_0010s20040 I
PRUPE_ppa018139mg Prunus persica PRUPE_ppa018139mg I
SapurV1A.0262s0080 Salix purpurea SapurV1A.0262s0080 I
SapurV1A.0709s0190 Salix purpurea SapurV1A.0709s0190 I
Solyc03g096350.2 Solanum lycopersicum Solyc03g096350.2 I
Solyc05g052610.2 Solanum lycopersicum Solyc05g052610.2 I
TCM_042604 Theobroma cacao TCM_042604 I
Thhalv10021322m.g Eutrema salsugineum Thhalv10021322m.g I
VIT_13s0019g03370 Vitis vinifera VIT_13s0019g03370 I