CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g03126
(
Litomosoides sigmodontis
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
nLs.2.1.2.g03126
T343562_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t03126-RA
TBP
132
213
DIQIRNVVCNYTLPLHIDLHRVALSSGNVAFDRGRGVLLKQKRNPSCYVKIYSSGKIYIVGCRSESECKRAARGVARMVQKS
nLs.2.1.2.t03126-RA
TBP
225
308
NYRVCNVLATCKMPFGVKIEELAQKYPDHSQYEPELSVGLIWRSTSPRATLRIHTTGSITVTGAASENDVMKAVEVIYPIVKEF
Links
Other
TBP
family TFs
Other
Litomosoides sigmodontis
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pm.sca_76_chr13_2_0000002
Nectria haematococca
fgenesh1_pm.sca_76_chr13_2_0000002
N
FGRRES_16926_M
Fusarium graminearum
FGRRES_16926_M
D
NechaG97913
Fusarium solani
NechaG97913
N
PV09_04965
Verruconis gallopava
PV09_04965
N
VDAG_02532
Verticillium dahliae
VDAG_02532
N
VDBG_02075
Verticillium albo atrum
VDBG_02075
N
VDBG_02075
Verticillium alfalfae
VDBG_02075
N