CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.sca_76_chr13_2_0000002
(
Nectria haematococca
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
fgenesh1_pm.sca_76_chr13_2_0000002
T227491_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.sca_76_chr13_2_0000002
Homeodomain
157
213
GTRFSRESVEILKNWLSSHSHHPYPDEKEKEMLQGQTGLNKTQIANWLANARRRGKT
Links
Other
Homeodomain
family TFs
Other
Nectria haematococca
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG97913
Fusarium solani
NechaG97913
N
0.867
SEPMUDRAFT_106556
Sphaerulina musiva
SEPMUDRAFT_106556
N
0.684
PV09_04965
Verruconis gallopava
PV09_04965
N
0.661
VDBG_02075
Verticillium albo atrum
VDBG_02075
N
0.633
VDAG_02532
Verticillium dahliae
VDAG_02532
N
0.633
VDBG_02075
Verticillium alfalfae
VDBG_02075
N
0.633
VDAG_04837
Verticillium dahliae
VDAG_04837
I
0.628
SBOR_4183
Sclerotinia borealis
SBOR_4183
I
0.627
FOXG_05651
Fusarium oxysporum
FOXG_05651
I
0.608