CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra018126
(
Brassica rapa
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
Bra018126
T343780_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra018126.1-P
TCP
28
103
FQLLGKRDPDDNNQQQQQQQQPSPSSSSSLFSLHQHQQLSQTQPQPQQQKPQPQKDLQVTQEETAVVVAKKPPLKR
Bra018126.1-P
TCP
104
292
ASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPSHYRNAASTFSPNNIFSPSLLQQQQQRSGGGGFLHPHHHLQGRATTSSLFPGIDNFTPTTSFLNFHNPTKQEGDQDSEELSPDKKRRLQTTSDLHHQHDQIGGYT
Bra018126.1-P
TCP
346
456
TFPSINTAAAALYRSSVSGVSGGAVSSGLHFMNFAAPMAFLTGQQLATSSNHEINEDNNNNEGGRSDGGDHHNTQRHHHQQQQQQHHHHNILSGLNQYGRQVSGESQASDS
Links
Other
TCP
family TFs
Other
Brassica rapa
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.A00359
Eucalyptus grandis
Eucgr.A00359
N
Eucgr.A00365
Eucalyptus grandis
Eucgr.A00365
N
Eucgr.A00368
Eucalyptus grandis
Eucgr.A00368
N
Eucgr.A00369
Eucalyptus grandis
Eucgr.A00369
N
Eucgr.A00370
Eucalyptus grandis
Eucgr.A00370
N
Eucgr.A00435
Eucalyptus grandis
Eucgr.A00435
N
Eucgr.A00437
Eucalyptus grandis
Eucgr.A00437
N