CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GLYMA17G10760 *(Glycine max)* TCP
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03634 (TCP)	IPR005333	GLYMA17G10760	T343895_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PK12736.1 M01315_2.00	Cannabis sativa	NRRSCMYAYNNNNN	NNNNNRTRKGSYYN	PBM Lambert et al.(2019) pTH10121	0.978	0.642
TCP14 M07289_2.00	Arabidopsis thaliana	AVADAKVDBGTGGGDCCCAC	GTGGGHCCCACVHBMTHTBT	Dap-seq OMalley et al.(2016) TCP14_col_b	0.975	0.563
TCP15 M00892_2.00	Arabidopsis thaliana	NNGGNCCCAC	GTGGGNCCNN	PBM Franco-Zorrilla et al.(2014) TCP15	0.974	0.550
TCP15 M07277_2.00	Arabidopsis thaliana	RTRGGDCCCACHH	DDGTGGGHCCYAY	Dap-seq OMalley et al.(2016) At1g69690_col_a	0.974	0.550
TCP15 M07278_2.00	Arabidopsis thaliana	RTRGGNCCCACHW	WDGTGGGNCCYAY	Dap-seq OMalley et al.(2016) At1g69690_colamp_a	0.974	0.550
TCP15 M11394_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TCP15_01	0.974	0.550
TCP8 M01311_2.00	Arabidopsis thaliana	NGGNMCCAC	GTGGKNCCN	PBM Lambert et al.(2019) pTH11569	0.967	0.530
TCP22 M07279_2.00	Arabidopsis thaliana	RTRGGNCCCACHN	NDGTGGGNCCYAY	Dap-seq OMalley et al.(2016) At1g72010_colamp_a	0.963	0.477
TCP22 M07280_2.00	Arabidopsis thaliana	RTGGGDCCCACNN	NNGTGGGHCCCAY	Dap-seq OMalley et al.(2016) At1g72010_col	0.963	0.477
TCP23 M00891_2.00	Arabidopsis thaliana	NNGGKCCCAC	GTGGGMCCNN	PBM Franco-Zorrilla et al.(2014) TCP23	0.959	0.503
VIT_15s0048g01150 M02515_2.00	Vitis vinifera	NNGGNCCCAC	GTGGGNCCNN	PBM Weirauch et al.(2014) pTH9294	0.957	0.404
PK13314.1 M01316_2.00	Cannabis sativa	NNGGNCCCAC	GTGGGNCCNN	PBM Lambert et al.(2019) pTH11330	0.956	0.430
GLYMA19G26560 M02511_2.00	Glycine max	BGGBCCCAC	GTGGGVCCV	PBM Weirauch et al.(2014) pTH9184	0.954	0.430
TCP9 M01086_2.00	Arabidopsis thaliana	NNGGGCCCACN	NGTGGGCCCNN	PBM Sullivan et al.(2014) pTH9796	0.954	0.397
TCP9 M07281_2.00	Arabidopsis thaliana	RTGGGDCCCAC	GTGGGHCCCAY	Dap-seq OMalley et al.(2016) At2g45680_colamp_a	0.954	0.397
TCP9 M07282_2.00	Arabidopsis thaliana	DGTGGGRCCCACDDNDNDNBN	NVNHNHNHHGTGGGYCCCACH	Dap-seq OMalley et al.(2016) At2g45680_col_b	0.954	0.397
LjSGA_053525.1 M02518_2.00	Lotus japonicus	GGNCCCAC	GTGGGNCC	PBM Weirauch et al.(2014) pTH9201	0.954	0.404
cassava45561.m1 M02516_2.00	Manihot esculenta	KGGVCCCACH	DGTGGGBCCM	PBM Weirauch et al.(2014) pTH9207	0.953	0.430
TCP19 M02504_2.00	Arabidopsis thaliana	NNGGVCCCAC	GTGGGBCCNN	PBM Weirauch et al.(2014) pTH7452	0.952	0.391
PK14653.1 M01317_2.00	Cannabis sativa	BGGSCCCAC	GTGGGSCCV	PBM Lambert et al.(2019) pTH11324	0.952	0.397
PK14653.1 M02517_2.00	Cannabis sativa	BTGGGCCCAV	BTGGGCCCAV	PBM Weirauch et al.(2014) pTH9586	0.952	0.397
PCF2 M11399_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$PCF2_01	0.951	0.397
TCP7 M07294_2.00	Arabidopsis thaliana	RTGGGNCCCAC	GTGGGNCCCAY	Dap-seq OMalley et al.(2016) TCP7_col_a	0.950	0.397
AT-TCP20 M02507_2.00	Arabidopsis lyrata	GRSCCCAC	GTGGGSYC	PBM Weirauch et al.(2014) pTH9229	0.950	0.391
TCP20 M02502_2.00	Arabidopsis thaliana	GGSCCCACNN	NNGTGGGSCC	PBM Weirauch et al.(2014) pTH8159	0.950	0.384
TCP20 M07285_2.00	Arabidopsis thaliana	NNNNNNNNNNGTGGGRCCCAC	GTGGGYCCCACNNNNNNNNNN	Dap-seq OMalley et al.(2016) TCP20_col_a	0.950	0.384
TCP20 M07286_2.00	Arabidopsis thaliana	RTGGGDCCCACH	DGTGGGHCCCAY	Dap-seq OMalley et al.(2016) TCP20_colamp_a	0.950	0.384
TCP20 M11397_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TCP20_01	0.950	0.384
fgenesh2_kg.8__1074__AT5G51910.2 M02509_2.00	Arabidopsis lyrata	GRSCCCAC	GTGGGSYC	PBM Weirauch et al.(2014) pTH9232	0.950	0.397
TCP21 M07292_2.00	Arabidopsis thaliana	NNRTGGGDCCCACN	NGTGGGHCCCAYNN	Dap-seq OMalley et al.(2016) At5g08330_col_a	0.947	0.391
TCP21 M07293_2.00	Arabidopsis thaliana	RTRGGDCCCACH	DGTGGGHCCYAY	Dap-seq OMalley et al.(2016) At5g08330_colamp_a	0.947	0.391
OsI_08196 M02513_2.00	Oryza sativa	GGGCCCAC	GTGGGCCC	PBM Weirauch et al.(2014) pTH9274	0.942	0.377
OS02G0635800 M02512_2.00	Oryza sativa	NBGGGCCCVN	NBGGGCCCVN	PBM Weirauch et al.(2014) pTH8856	0.942	0.371
TCP11 M11395_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TCP11_01	0.895	0.384
TCP11 M11396_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TCP11_02	0.895	0.384
For this family, TFs with SR scores > 0.822* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GLYMA17G10760.2	TCP	78	268	TSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFNPNFSLQQQQRRTFFPGIALSSEHNTTTNNTSTLVNFQQSNNLTTTMLQQQAKPELRDGLPSSLDISDTRTNTEDPSRKRRPTTEQQDLSPTTQQQHHQ

Links
Other TCP family TFs
Other *Glycine max* TFs

658 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AAEL001736	Aedes aegypti	AAEL001736	N
Alligator_sinensis_CCG004871.1	Alligator sinensis	Alligator_sinensis_CCG004871.1	N
BGLB013051	Biomphalaria glabrata	BGLB013051	N
CapteG164570	Capitella teleta	CapteG164570	N
CGI_10026455	Crassostrea gigas	CGI_10026455	N
Cmyd_10002903	Chelonia mydas	Cmyd_10002903	N
CPIJ016312	Culex quinquefasciatus	CPIJ016312	N
CpipJ_CPIJ016312	Culex pipiens	CpipJ_CPIJ016312	N
DAPPUDRAFT_111472	Daphnia pulex	DAPPUDRAFT_111472	N
ENSAMEG00000008949	Ailuropoda melanoleuca	ENSAMEG00000008949	N
ENSAMXG00000008885	Astyanax mexicanus	ENSAMXG00000008885	N
ENSAPLG00000007652	Anas platyrhynchos	ENSAPLG00000007652	N
PRDM13	Bos taurus	ENSBTAG00000006095	N
PRDM13	Canis familiaris	ENSCAFG00000023314	N
PRDM13	Choloepus hoffmanni	ENSCHOG00000011613	N
PRDM13	Callithrix jacchus	ENSCJAG00000001421	N
ENSCSAG00000014622	Chlorocebus sabaeus	ENSCSAG00000014622	N
prdm13	Danio rerio	ENSDARG00000078701	N
PRDM13	Dasypus novemcinctus	ENSDNOG00000006520	N
ENSDORG00000003558	Dipodomys ordii	ENSDORG00000003558	N
PRDM13	Felis catus	ENSFCAG00000010288	N
PRDM13	Homo sapiens	ENSG00000112238	N
prdm13	Gasterosteus aculeatus	ENSGACG00000005032	N
PRDM13	Gorilla gorilla	ENSGGOG00000006947	N
ENSGMOG00000006125	Gadus morhua	ENSGMOG00000006125	N
ENSLACG00000008814	Latimeria chalumnae	ENSLACG00000008814	N
PRDM13	Loxodonta africana	ENSLAFG00000012439	N
ENSLOCG00000017084	Lepisosteus oculatus	ENSLOCG00000017084	N
ENSMICG00000001097	Microcebus murinus	ENSMICG00000001097	N
PRDM13	Myotis lucifugus	ENSMLUG00000001899	N
PRDM13	Monodelphis domestica	ENSMODG00000018089	N
ENSMPUG00000001648	Mustela putorius furo	ENSMPUG00000001648	N
Prdm13	Mus musculus	ENSMUSG00000040478	N
ENSNLEG00000013845	Nomascus leucogenys	ENSNLEG00000013845	N
ENSOARG00000011775	Ovis aries	ENSOARG00000011775	N
PRDM13	Oryctolagus cuniculus	ENSOCUG00000003216	N
PRDM13	Otolemur garnettii	ENSOGAG00000031927	N
ENSONIG00000000112	Oreochromis niloticus	ENSONIG00000000112	N
prdm13	Oryzias latipes	ENSORLG00000002129	N
ENSP00000352819	Macaca fascicularis	ENSP00000352819	N
ENSP00000352819-D1	Bos grunniens	ENSP00000352819-D1	N
ENSPANG00000017638	Papio anubis	ENSPANG00000017638	N
ENSPFOG00000019371	Poecilia formosa	ENSPFOG00000019371	N
ENSPPYG00000016866	Pongo abelii	ENSPPYG00000016866	N
ENSPSIG00000002567	Pelodiscus sinensis	ENSPSIG00000002567	N
PRDM13	Pan troglodytes	ENSPTRG00000018445	N
PRDM13	Pteropus vampyrus	ENSPVAG00000001695	N
Prdm13	Rattus norvegicus	ENSRNOG00000007683	N
ENSSHAG00000013340	Sarcophilus harrisii	ENSSHAG00000013340	N
PRDM13	Sus scrofa	ENSSSCG00000004354	N
ENSSTOG00000016567	Ictidomys tridecemlineatus	ENSSTOG00000016567	N
prdm13	Tetraodon nigroviridis	ENSTNIG00000006867	N
prdm13	Takifugu rubripes	ENSTRUG00000000334	N
PRDM13	Tursiops truncatus	ENSTTRG00000004705	N
ENSXMAG00000002547	Xiphophorus maculatus	ENSXMAG00000002547	N
CG13296	Drosophila melanogaster	FBgn0035687	N
GA12179	Drosophila pseudoobscura	FBgn0072227	N
GF23530	Drosophila ananassae	FBgn0100524	N
GG15330	Drosophila erecta	FBgn0107582	N
GL15563	Drosophila persimilis	FBgn0153167	N
GM14767	Drosophila sechellia	FBgn0169688	N
GD13944	Drosophila simulans	FBgn0185640	N
GK17273	Drosophila willistoni	FBgn0219272	N
GE21548	Drosophila yakuba	FBgn0238803	N
GB51085	Apis mellifera	GB51085	N
gw.79.7.1	Branchiostoma floridae	gw.79.7.1	N
HelroG144862	Helobdella robusta	HelroG144862	N
HHAL009600-PA	Halyomorpha halys	HHAL009600-PA	N
L798_05013	Zootermopsis nevadensis	L798_05013	N
LotgiG130257	Lottia gigantea	LotgiG130257	N
MESCA000924	Megaselia scalaris	MESCA000924	N
NEMVEDRAFT_v1g66221	Nematostella vectensis	NEMVEDRAFT_v1g66221	N
NV14899	Nasonia vitripennis	NV14899	N
Ocbimv22009191m.g	Octopus bimaculoides	Ocbimv22009191m.g	N
Ogr12758	Ophisaurus gracilis	Ogr12758	N
PHUM605290	Pediculus humanus	PHUM605290	N
RPRC014451	Rhodnius prolixus	RPRC014451	N
Sakowv30027334m.g	Saccoglossus kowalevskii	Sakowv30027334m.g	N
SMAR008272	Strigamia maritima	SMAR008272	N
SMAR010327	Strigamia maritima	SMAR010327	N
SMU15022318	Schmidtea mediterranea	SMU15022318	N
SPU_012050	Strongylocentrotus purpuratus	SPU_012050	N
TC014373	Tribolium castaneum	TC014373	N
tetur10g01540	Tetranychus urticae	tetur10g01540	N
prdm13	Xenopus tropicalis	XB-GENE-960155	N
YQE_11778	Dendroctonus ponderosae	YQE_11778	N

GLYMA17G10760 (Glycine max) TCP

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

658 Related TFs

GLYMA17G10760 **(Glycine max)
TCP**