CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sakowv30027334m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30027334m.g
T142372_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23919677_peptide
C2H2 ZF
282
304
HLCIYCGKLYSRKYGLKIHLRTH
23919677_peptide
C2H2 ZF
310
332
LKCKVCLRPFGDPSNLNKHIRLH
23919677_peptide
C2H2 ZF
339
362
YRCEYCGKVLVRRRDLDRHVKSRH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPU_012050
Strongylocentrotus purpuratus
SPU_012050
N
0.821
Alligator_sinensis_CCG004871.1
Alligator sinensis
Alligator_sinensis_CCG004871.1
N
0.811
ENSAPLG00000007652
Anas platyrhynchos
ENSAPLG00000007652
N
0.811
PRDM13
Oryctolagus cuniculus
ENSOCUG00000003216
N
0.811
Ocbimv22009191m.g
Octopus bimaculoides
Ocbimv22009191m.g
N
0.810
HHAL009600-PA
Halyomorpha halys
HHAL009600-PA
N
0.809
ENSPANG00000017638
Papio anubis
ENSPANG00000017638
N
0.807
ENSPPYG00000016866
Pongo abelii
ENSPPYG00000016866
N
0.807
ENSPSIG00000002567
Pelodiscus sinensis
ENSPSIG00000002567
N
0.807
PRDM13
Pan troglodytes
ENSPTRG00000018445
N
0.807
PRDM13
Otolemur garnettii
ENSOGAG00000031927
N
0.807
ENSMPUG00000001648
Mustela putorius furo
ENSMPUG00000001648
N
0.807
Prdm13
Rattus norvegicus
ENSRNOG00000007683
N
0.807
ENSNLEG00000013845
Nomascus leucogenys
ENSNLEG00000013845
N
0.807
Prdm13
Mus musculus
ENSMUSG00000040478
N
0.807
ENSOARG00000011775
Ovis aries
ENSOARG00000011775
N
0.807
ENSSTOG00000016567
Ictidomys tridecemlineatus
ENSSTOG00000016567
N
0.807
ENSP00000352819-D1
Bos grunniens
ENSP00000352819-D1
N
0.807
ENSP00000352819
Macaca fascicularis
ENSP00000352819
N
0.807
gw.79.7.1
Branchiostoma floridae
gw.79.7.1
N
0.807
prdm13
Xenopus tropicalis
XB-GENE-960155
N
0.807
Cmyd_10002903
Chelonia mydas
Cmyd_10002903
N
0.807
PRDM13
Tursiops truncatus
ENSTTRG00000004705
N
0.807
PRDM13
Sus scrofa
ENSSSCG00000004354
N
0.807
PRDM13
Monodelphis domestica
ENSMODG00000018089
N
0.807
prdm13
Takifugu rubripes
ENSTRUG00000000334
N
0.807
ENSSHAG00000013340
Sarcophilus harrisii
ENSSHAG00000013340
N
0.807
PRDM13
Pteropus vampyrus
ENSPVAG00000001695
N
0.807
PRDM13
Echinops telfairi
ENSETEG00000004709
N
0.807
PRDM13
Felis catus
ENSFCAG00000010288
N
0.807
PRDM13
Homo sapiens
ENSG00000112238
N
0.807
PRDM13
Choloepus hoffmanni
ENSCHOG00000011613
N
0.807
ENSDORG00000003558
Dipodomys ordii
ENSDORG00000003558
N
0.807
ENSCSAG00000014622
Chlorocebus sabaeus
ENSCSAG00000014622
N
0.807
prdm13
Danio rerio
ENSDARG00000078701
N
0.807
PRDM13
Dasypus novemcinctus
ENSDNOG00000006520
N
0.807
PRDM13
Myotis lucifugus
ENSMLUG00000001899
N
0.807
ENSAMEG00000008949
Ailuropoda melanoleuca
ENSAMEG00000008949
N
0.807
PRDM13
Loxodonta africana
ENSLAFG00000012439
N
0.807
ENSLOCG00000017084
Lepisosteus oculatus
ENSLOCG00000017084
N
0.807
ENSMICG00000001097
Microcebus murinus
ENSMICG00000001097
N
0.807
PRDM13
Canis familiaris
ENSCAFG00000023314
N
0.807
ENSGMOG00000006125
Gadus morhua
ENSGMOG00000006125
N
0.807
PRDM13
Bos taurus
ENSBTAG00000006095
N
0.807
PRDM13
Gorilla gorilla
ENSGGOG00000006947
N
0.807
PRDM13
Callithrix jacchus
ENSCJAG00000001421
N
0.807
GB51085
Apis mellifera
GB51085
N
0.803
ENSXMAG00000002547
Xiphophorus maculatus
ENSXMAG00000002547
N
0.803
prdm13
Gasterosteus aculeatus
ENSGACG00000005032
N
0.803
prdm13
Tetraodon nigroviridis
ENSTNIG00000006867
N
0.803
ENSONIG00000000112
Oreochromis niloticus
ENSONIG00000000112
N
0.803
ENSLACG00000008814
Latimeria chalumnae
ENSLACG00000008814
N
0.803
ENSPFOG00000019371
Poecilia formosa
ENSPFOG00000019371
N
0.803
prdm13
Oryzias latipes
ENSORLG00000002129
N
0.803
ENSAMXG00000008885
Astyanax mexicanus
ENSAMXG00000008885
N
0.800
RPRC014451
Rhodnius prolixus
RPRC014451
N
0.799
BGLB013051
Biomphalaria glabrata
BGLB013051
N
0.796
LotgiG130257
Lottia gigantea
LotgiG130257
N
0.791
SMAR010327
Strigamia maritima
SMAR010327
N
0.787
SMAR008272
Strigamia maritima
SMAR008272
N
0.787
CGI_10026455
Crassostrea gigas
CGI_10026455
N
0.787
L798_05013
Zootermopsis nevadensis
L798_05013
N
0.786
CapteG164570
Capitella teleta
CapteG164570
N
0.784
Ogr12758
Ophisaurus gracilis
Ogr12758
N
0.783
DAPPUDRAFT_111472
Daphnia pulex
DAPPUDRAFT_111472
N
0.781
TC014373
Tribolium castaneum
TC014373
N
0.780
NV14899
Nasonia vitripennis
NV14899
N
0.780
GF23530
Drosophila ananassae
FBgn0100524
N
0.780
NEMVEDRAFT_v1g66221
Nematostella vectensis
NEMVEDRAFT_v1g66221
N
0.776
GA12179
Drosophila pseudoobscura
FBgn0072227
N
0.774
GL15563
Drosophila persimilis
FBgn0153167
N
0.774
PHUM605290
Pediculus humanus
PHUM605290
N
0.771
YQE_11778
Dendroctonus ponderosae
YQE_11778
N
0.767
GM14767
Drosophila sechellia
FBgn0169688
N
0.765
MESCA000924
Megaselia scalaris
MESCA000924
N
0.765
GG15330
Drosophila erecta
FBgn0107582
N
0.765
CG13296
Drosophila melanogaster
FBgn0035687
N
0.765
GD13944
Drosophila simulans
FBgn0185640
N
0.765
GK17273
Drosophila willistoni
FBgn0219272
N
0.765
GE21548
Drosophila yakuba
FBgn0238803
N
0.765
CpipJ_CPIJ016312
Culex pipiens
CpipJ_CPIJ016312
N
0.761
AAEL001736
Aedes aegypti
AAEL001736
N
0.761
CPIJ016312
Culex quinquefasciatus
CPIJ016312
N
0.761
TMUE_s0005011900
Trichuris muris
TMUE_s0005011900
N
0.757
HelroG144862
Helobdella robusta
HelroG144862
N
0.757
XP_002158638.1
Hydra magnipapillata
XP_002158638.1
N
0.756