OS01G0213800 (Oryza sativa)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 OS01G0213800 T344224_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0213800
M11398_2.00		 Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.943 0.481
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.941 0.473
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.937 0.466
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.937 0.466
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.937 0.466
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.893 0.412
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.886 0.374
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.878 0.389
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.878 0.389
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.872 0.336
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.868 0.351
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.866 0.374
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.866 0.374
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.832 0.336
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.832 0.336
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS01T0213800-01 TCP 208 399

Links

Other TCP family TFs
Other Oryza sativa TFs

433 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.000
BGLB010819 Biomphalaria glabrata BGLB010819 I 0.000
D915_08967 Fasciola hepatica D915_08967 I 0.000
D915_08968 Fasciola hepatica D915_08968 I 0.000
DILT_0001372901 Diphyllobothrium latum DILT_0001372901 I 0.000
ECANG7_00484 Echinococcus canadensis ECANG7_00484 N 0.000
EmuJ_001029400 Echinococcus multilocularis EmuJ_001029400 N 0.000
RBPJ Homo sapiens ENSG00000168214 D 0.000
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I 0.000
GLOINDRAFT_27407 Rhizophagus irregularis GLOINDRAFT_27407 N 0.000
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.000
HmN_000214100 Hymenolepis microstoma HmN_000214100 N 0.000
HNAJ_0000209001 Hymenolepis nana HNAJ_0000209001 N 0.000
SCUD_0000326701 Schistosoma curassoni SCUD_0000326701 I 0.000
Sjc_0108400 Schistosoma japonicum Sjc_0108400 I 0.000
SMRZ_0000802101 Schistosoma margrebowiei SMRZ_0000802101 I 0.000
SMTD_0001089601 Schistosoma mattheei SMTD_0001089601 I 0.000
SMTD_0001799501 Schistosoma mattheei SMTD_0001799501 N 0.000
SPER_0002728301 Spirometra erinaceieuropaei SPER_0002728301 N 0.000
SPER_0003199901 Spirometra erinaceieuropaei SPER_0003199901 I 0.000
SPER_0003346601 Spirometra erinaceieuropaei SPER_0003346601 N 0.000
tetur11g06371 Tetranychus urticae tetur11g06371 I 0.000
TRE_0000568701 Trichobilharzia regenti TRE_0000568701 I 0.000
TsM_000119200 Taenia solium TsM_000119200 N 0.000