CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400024928
(
Solanum tuberosum
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
PGSC0003DMG400024928
T344270_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400064164
TCP
146
364
RQTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNISLRSSGSTLSAPPSKSAPHSFHSALALAAAHHTPHPFEEGFSHMLGFHHNTHLLTQNPIADSIPGGSGGGDGTGGGEGADNYLRKRYREDLFKEEGSSNQQGEASGGSSSPSNKQFKGNSSQLPNKPNSQEGVAGQSSNMLRHTNMM
PGSC0003DMT400064164
TCP
452
534
PLQLGSMLMQQQQQPSQHLGLGMSETNLGMLAALNAYSRGGLNMNSDHQQSHSLDHHQQQQQHQQQHQPQPTDSDEDDPNNSQ
Links
Other
TCP
family TFs
Other
Solanum tuberosum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30005.m001245
Ricinus communis
30005.m001245
N
BGIOSGA028509
Oryza indica
BGIOSGA028509
N
Bra011042
Brassica rapa
Bra011042
N
Cla005572
Citrullus lanatus
Cla005572
N
evm.TU.supercontig_817.1
Carica papaya
evm.TU.supercontig_817.1
N
e_gw1.141.94.1
Physcomitrella patens
e_gw1.141.94.1
N
F775_00616
Aegilops tauschii
F775_00616
N
F775_22357
Aegilops tauschii
F775_22357
N
GRMZM2G162409
Zea mays
GRMZM2G162409
I
LjSGA_045379.1
Lotus japonicus
LjSGA_045379.1
N
LjSGA_102149.2
Lotus japonicus
LjSGA_102149.2
N
MLOC_63597
Hordeum vulgare
MLOC_63597
I
OGLUM08G12590
Oryza glumaepatula
OGLUM08G12590
I
OLONG_004751
Oryza longistaminata
OLONG_004751
N
OMERI02G34900
Oryza meridionalis
OMERI02G34900
N
OPUNC02G34240
Oryza punctata
OPUNC02G34240
N
OPUNC08G10730
Oryza punctata
OPUNC08G10730
N
orange1.1g038008m.g
Citrus sinensis
orange1.1g038008m.g
N
OS08G0346400
Oryza sativa
OS08G0346400
I
Pavir.Ba02286
Panicum virgatum
Pavir.Ba02286
N
PDK_20s1744641g001
Phoenix dactylifera
PDK_20s1744641g001
N
PGSC0003DMG400007401
Solanum tuberosum
PGSC0003DMG400007401
I
PRUPE_ppa007491m2g
Prunus persica
PRUPE_ppa007491m2g
N
PRUPE_ppa025217mg
Prunus persica
PRUPE_ppa025217mg
N