Sb02g024450 (Sorghum bicolor)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Sb02g024450 T344337_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TB1
M01312_2.00 		Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740 		0.844 0.598
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.843 0.537
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb02g024450.1 TCP 102 225

Links

Other TCP family TFs
Other Sorghum bicolor TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30170.m014145 Ricinus communis 30170.m014145 I
BPC6 Arabidopsis thaliana AT5G42520 D
Bo6g076850 Brassica oleracea Bo6g076850 I
Bostr.3148s0250 Boechera stricta Bostr.3148s0250 I
Bra003405 Brassica rapa Bra003405 I
Cagra.9562s0001 Capsella grandiflora Cagra.9562s0001 I
Carubv10026720m.g Capsella rubella Carubv10026720m.g I
cassava22532.valid.m1 Manihot esculenta cassava22532.valid.m1 I
chr1.CM0195.10.nd Lotus japonicus chr1.CM0195.10.nd I
Ciclev10001400m.g Citrus clementina Ciclev10001400m.g I
Cucsa.159750 Cucumis sativus Cucsa.159750 I
Eucgr.D01054 Eucalyptus grandis Eucgr.D01054 I
BPC6 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8000489 I
gene08483-v1.0-hybrid Fragaria vesca gene08483-v1.0-hybrid I
GLYMA04G02860 Glycine max GLYMA04G02860 I
GLYMA06G02880 Glycine max GLYMA06G02880 I
Gorai.002G124900 Gossypium raimondii Gorai.002G124900 I
Lus10012389.g Linum usitatissimum Lus10012389.g I
Lus10024313.g Linum usitatissimum Lus10024313.g I
MDP0000933138 Malus domestica MDP0000933138 I
MDP0000947167 Malus domestica MDP0000947167 I
MTR_1g023660 Medicago truncatula MTR_1g023660 I
Ocbimv22014894m.g Octopus bimaculoides Ocbimv22014894m.g I
orange1.1g018368m.g Citrus sinensis orange1.1g018368m.g I
PGSC0003DMG400003719 Solanum tuberosum PGSC0003DMG400003719 I
PK03443.1 Cannabis sativa PK03443.1 I
Pm006246 Prunus mume Pm006246 I
POPTR_0002s02820 Populus trichocarpa POPTR_0002s02820 I
POPTR_0005s25720 Populus trichocarpa POPTR_0005s25720 I
PRUPE_ppa008316mg Prunus persica PRUPE_ppa008316mg I
SapurV1A.0025s0690 Salix purpurea SapurV1A.0025s0690 I
SapurV1A.0762s0100 Salix purpurea SapurV1A.0762s0100 I
Solyc04g081170.2 Solanum lycopersicum Solyc04g081170.2 I
TCM_034171 Theobroma cacao TCM_034171 I
Thhalv10006075m.g Eutrema salsugineum Thhalv10006075m.g I
VIT_18s0001g13730 Vitis vinifera VIT_18s0001g13730 I