SapurV1A.0500s0140 (Salix purpurea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 SapurV1A.0500s0140 T345052_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.949 0.429
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.946 0.410
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.946 0.410
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.946 0.410
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.944 0.417
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.930 0.404
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.881 0.333
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.874 0.340
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.866 0.333
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.851 0.288
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.826 0.269
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0500s0140.1.p TCP 22 243

Links

Other TCP family TFs
Other Salix purpurea TFs

374 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30055.m001550 Ricinus communis 30055.m001550 I 0.000
AMTR_s00031p00017860 Amborella trichopoda AMTR_s00031p00017860 I 0.000
cassava13378.valid.m1 Manihot esculenta cassava13378.valid.m1 I 0.000
Ca_07057 Cicer arietinum Ca_07057 I 0.000
Cla008794 Citrullus lanatus Cla008794 I 0.000
Eucgr.J00491 Eucalyptus grandis Eucgr.J00491 I 0.000
evm.TU.supercontig_32.14 Carica papaya evm.TU.supercontig_32.14 I 0.000
gene21797-v1.0-hybrid Fragaria vesca gene21797-v1.0-hybrid I 0.000
GLYMA11G19026 Glycine max GLYMA11G19026 I 0.000
GLYMA12G09430 Glycine max GLYMA12G09430 I 0.000
Gorai.006G111800 Gossypium raimondii Gorai.006G111800 I 0.000
GSMUA_Achr2G06770_001 Musa acuminata GSMUA_Achr2G06770_001 I 0.000
Lus10034296.g Linum usitatissimum Lus10034296.g I 0.000
Lus10041475.g Linum usitatissimum Lus10041475.g I 0.000
mgf001395m Mimulus guttatus mgf001395m I 0.000
mgf016030m Mimulus guttatus mgf016030m N 0.000
MTR_2g086420 Medicago truncatula MTR_2g086420 I 0.000
PK07387.1 Cannabis sativa PK07387.1 I 0.000
Pm001317 Prunus mume Pm001317 I 0.000
POPTR_0004s21360 Populus trichocarpa POPTR_0004s21360 I 0.000
POPTR_0009s16590 Populus trichocarpa POPTR_0009s16590 I 0.000
PRUPE_ppa004537mg Prunus persica PRUPE_ppa004537mg I 0.000
SapurV1A.0125s0260 Salix purpurea SapurV1A.0125s0260 I 0.000
SapurV1A.0374s0050 Salix purpurea SapurV1A.0374s0050 I 0.000
Sb04g006500 Sorghum bicolor Sb04g006500 I 0.000
TCM_041421 Theobroma cacao TCM_041421 I 0.000
TGA9 Vitis vinifera VIT_06s0080g00360 I 0.000