CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

OS08G0369600 *(Oryza sativa)* TCR/CxC
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03638 (TCR)	IPR005172	OS08G0369600	T345696_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
fgeneshCV_pg.C_scaffold_18000164 M02534_2.00	Chlorella vulgaris	NNNNDYRAAH	DTTYRHNNNN	PBM Weirauch et al.(2014) pTH9252	0.672	0.693
AT2G20110 M02520_2.00	Arabidopsis thaliana	DTTTAAAH	DTTTAAAH	PBM Weirauch et al.(2014) pTH7914	0.672	0.667
TCX5 M02523_2.00	Arabidopsis thaliana	NRTTCAAAYN	NRTTTGAAYN	PBM Weirauch et al.(2014) pTH8164	0.672	0.667
AT2G20110 M07295_2.00	Arabidopsis thaliana	WWHWAADATTYAAAW	WTTTRAATHTTWDWW	Dap-seq OMalley et al.(2016) AT2G20110_col_a	0.672	0.667
AT2G20110 M07296_2.00	Arabidopsis thaliana	WWHNAAATTYAAAHN	NDTTTRAATTTNDWW	Dap-seq OMalley et al.(2016) AT2G20110_colamp_a	0.672	0.667
AT5G25790 M01319_2.00	Arabidopsis thaliana	NHYRAAHN	NDTTYRDN	PBM Lambert et al.(2019) pTH11533	0.672	0.627
TCX3 M01087_2.00	Arabidopsis thaliana	NNDTTYAAAH	DTTTRAAHNN	PBM Sullivan et al.(2014) pTH7218	0.672	0.613
TCX3 M02522_2.00	Arabidopsis thaliana	WTTYAAAH	DTTTRAAW	PBM Weirauch et al.(2014) pTH7421	0.672	0.613
TCX3 M07297_2.00	Arabidopsis thaliana	DWTTYRAAWTTBAAW	WTTVAAATTYRAAWH	Dap-seq OMalley et al.(2016) SOL1_colamp_a	0.672	0.613
TCX3 M07298_2.00	Arabidopsis thaliana	WTWWAAAATTYAAAW	WTTTRAATTTTWWAW	Dap-seq OMalley et al.(2016) SOL1_col	0.672	0.613
fgenesh1_pg.C_Chr_09.0001000301 M02533_2.00	Ostreococcus tauri	NNNNNRHNN	NNDYNNNNN	PBM Weirauch et al.(2014) pTH9457	0.672	0.600
TCX2 M07300_2.00	Arabidopsis thaliana	WWTYVAAATTYRAAW	WTTYRAATTTBRAWW	Dap-seq OMalley et al.(2016) TCX2_col_a	0.672	0.600
TCX2 M07301_2.00	Arabidopsis thaliana	TTYVAAATTYRAAW	WTTYRAATTTBRAA	Dap-seq OMalley et al.(2016) TCX2_colamp_a	0.672	0.600
BRADI1G55710 M02525_2.00	Brachypodium distachyon	NVTBYRVABN	NVTBYRVABN	PBM Weirauch et al.(2014) pTH9241	0.672	0.587
LIN54 M02527_2.00	Gallus gallus	NRTTYAAAH	DTTTRAAYN	PBM Weirauch et al.(2014) pTH8566	0.672	0.573
PK22848.1 M02532_2.00	Cannabis sativa	NNNYNAAATTTNN	NNAAATTTNRNNN	PBM Weirauch et al.(2014) pTH9724	0.672	0.573
gw1.20.00.89.1 M02535_2.00	Ostreococcus tauri	WNYWBVWRNW	WNYWBVWRNW	PBM Weirauch et al.(2014) pTH9647	0.672	0.573
TSO1 M07299_2.00	Arabidopsis thaliana	WWWTWDAAATTYAAA	TTTRAATTTHWAWWW	Dap-seq OMalley et al.(2016) TSO1_col_a	0.672	0.573
ENSTSYG00000005291 M02528_2.00	Tarsius syrichta	NNWDHDHWNN	NNWDHDHWNN	PBM Weirauch et al.(2014) pTH9366	0.672	0.560
NEMVEDRAFT_v1g111410 M01320_2.00	Nematostella vectensis	NNNNYRWRN	NYWYRNNNN	PBM Lambert et al.(2019) pTH9771	0.672	0.560
SPU_025306 M02531_2.00	Strongylocentrotus purpuratus	NNNNWYRAAH	DTTYRWNNNN	PBM Weirauch et al.(2014) pTH9286	0.672	0.560
XP_002124866.1 M01321_2.00	Ciona intestinalis	NDTTYRAAN	NTTYRAAHN	PBM Lambert et al.(2019) pTH9835	0.672	0.560
TCX4 M02521_2.00	Arabidopsis thaliana	DWTTYRAAWH	DWTTYRAAWH	PBM Weirauch et al.(2014) pTH7573	0.672	0.547
lin54 M02526_2.00	Danio rerio	NHTYRAAH	DTTYRADN	PBM Weirauch et al.(2014) pTH8399	0.672	0.547
BGIBMGA008956 M02524_2.00	Bombyx mori	AATTTAAAW	WTTTAAATT	PBM Weirauch et al.(2014) pTH9238	0.672	0.533
GE12548 M02529_2.00	Drosophila yakuba	DTTYAAAY	RTTTRAAH	PBM Weirauch et al.(2014) pTH9262	0.672	0.507
GSPATT00010696001 M02530_2.00	Paramecium tetraurelia	NNBRAAHN	NDTTYVNN	PBM Weirauch et al.(2014) pTH8720	0.672	0.507
PK27683.1 M01322_2.00	Cannabis sativa	NDTTYAAAH	DTTTRAAHN	PBM Lambert et al.(2019) pTH11347	0.672	0.480
For this family, TFs with SR scores > 0.660* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OS08T0369600-01	TCR/CxC	171	207	KTNCSCKYSKCLKLYCECFEKGRYCIGCNCTNCCNNV
OS08T0369600-01	TCR/CxC	254	291	TKGCKCKRTECLKKYCECFKASVFCSENCRCTGCKNYK

Links
Other TCR/CxC family TFs
Other *Oryza sativa* TFs

1213 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
BGIOSGA008185	Oryza indica	BGIOSGA008185	N
BRADI3G43310	Brachypodium distachyon	BRADI3G43310	N
GRMZM2G024976	Zea mays	GRMZM2G024976	N
GSMUA_Achr6G21080_001	Musa acuminata	GSMUA_Achr6G21080_001	I
LPERR02G13140	Leersia perrieri	LPERR02G13140	I
MLOC_42821	Hordeum vulgare	MLOC_42821	I
OBART02G16380	Oryza barthii	OBART02G16380	N
OGLUM02G16420	Oryza glumaepatula	OGLUM02G16420	N
OLONG_013998	Oryza longistaminata	OLONG_013998	N
OMERI02G15910	Oryza meridionalis	OMERI02G15910	N
ONIVA02G17640	Oryza nivara	ONIVA02G17640	N
OPUNC02G14620	Oryza punctata	OPUNC02G14620	N
ORUFI02G16870	Oryza rufipogon	ORUFI02G16870	N
OS02G0469900	Oryza sativa	OS02G0469900	N
Pavir.Aa02269	Panicum virgatum	Pavir.Aa02269	N
Pavir.Ab01767	Panicum virgatum	Pavir.Ab01767	N
Sb04g017850	Sorghum bicolor	Sb04g017850	N
Si017168m.g	Setaria italica	Si017168m.g	N
Traes_6AS_A465E600A	Triticum aestivum	Traes_6AS_A465E600A	N
TRIUR3_18598	Triticum urartu	TRIUR3_18598	N

OS08G0369600 (Oryza sativa) TCR/CxC

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1213 Related TFs

OS08G0369600 **(Oryza sativa)
TCR/CxC**