Si022238m.g (Setaria italica)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 Si022238m.g T345791_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.707
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.693
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.693
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.693
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.693
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.693
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.693
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.667
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.653
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.600
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.600
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.600
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.600
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.600
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.600
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.600
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.587
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.533
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.520
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.520
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.520
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.520
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.507
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.507
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.507
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.507
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.493
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.493
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si022238m TCR/CxC 94 131
Si022238m TCR/CxC 169 205

Links

Other TCR/CxC family TFs
Other Setaria italica TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007110 Calypte anna Aan_R007110 I
Aan_R013126 Calypte anna Aan_R013126 I
Afo_R011902 Aptenodytes forsteri Afo_R011902 I
Alligator_sinensis_CCG016013.1 Alligator sinensis Alligator_sinensis_CCG016013.1 I
Brh_R008138 Buceros rhinoceros Brh_R008138 I
CapteG154409 Capitella teleta CapteG154409 I
CGI_10019731 Crassostrea gigas CGI_10019731 I
Cmyd_10020111 Chelonia mydas Cmyd_10020111 I
csin104676 Clonorchis sinensis csin104676 I
DI09_49p90 Microsporidia sp DI09_49p90 I
DI09_67p120 Microsporidia sp DI09_67p120 I
ECANG7_07925 Echinococcus canadensis ECANG7_07925 I
FOXI1 Anolis carolinensis ENSACAG00000015950 I
ENSAMEG00000001516 Ailuropoda melanoleuca ENSAMEG00000001516 I
ENSAMXG00000005839 Astyanax mexicanus ENSAMXG00000005839 I
ENSAMXG00000008393 Astyanax mexicanus ENSAMXG00000008393 I
ENSAMXG00000012362 Astyanax mexicanus ENSAMXG00000012362 I
ENSAPLG00000012296 Anas platyrhynchos ENSAPLG00000012296 I
FOXI1 Bos taurus ENSBTAG00000014620 I
ENSBTAP00000050534-D2 Bos grunniens ENSBTAP00000050534-D2 I
FOXI1 Canis familiaris ENSCAFG00000016968 I
foxi-a Ciona intestinalis ENSCING00000007221 I
FOXI1 Callithrix jacchus ENSCJAG00000011646 I
ENSCSAG00000010076 Chlorocebus sabaeus ENSCSAG00000010076 I
ENSCSAVG00000005989 Ciona savignyi ENSCSAVG00000005989 I
foxi3b Danio rerio ENSDARG00000009550 I
foxi3a Danio rerio ENSDARG00000055926 I
FOXI1 Dasypus novemcinctus ENSDNOG00000007480 I
ENSFALG00000009556 Ficedula albicollis ENSFALG00000009556 I
FOXI1 Felis catus ENSFCAG00000000835 I
FOXI1 Homo sapiens ENSG00000168269 D
foxi3a Gasterosteus aculeatus ENSGACG00000018474 I
FOXI1 Gallus gallus ENSGALG00000002105 I
FOXI1 Gorilla gorilla ENSGGOG00000015780 I
ENSGMOG00000001944 Gadus morhua ENSGMOG00000001944 I
ENSLACG00000017904 Latimeria chalumnae ENSLACG00000017904 I
FOXI1 Loxodonta africana ENSLAFG00000026591 I
ENSMEUG00000000316 Macropus eugenii ENSMEUG00000000316 I
FOXI1 Meleagris gallopavo ENSMGAG00000002015 I
FOXI1 Microcebus murinus ENSMICG00000012575 I
FOXI1 Myotis lucifugus ENSMLUG00000027832 I
FOXI1 Macaca mulatta ENSMMUG00000014124 I
FOXI1 Monodelphis domestica ENSMODG00000006890 I
ENSMPUG00000012982 Mustela putorius furo ENSMPUG00000012982 I
Foxi1 Mus musculus ENSMUSG00000047861 D
ENSNLEG00000005109 Nomascus leucogenys ENSNLEG00000005109 I
ENSOARG00000003151 Ovis aries ENSOARG00000003151 I
FOXI1 Oryctolagus cuniculus ENSOCUG00000000836 I
FOXI1 Otolemur garnettii ENSOGAG00000032689 I
ENSONIG00000017618 Oreochromis niloticus ENSONIG00000017618 I
ENSP00000304286 Macaca fascicularis ENSP00000304286 I
ENSPANG00000013256 Papio anubis ENSPANG00000013256 I
FOXI1 Procavia capensis ENSPCAG00000006657 I
ENSPFOG00000015741 Poecilia formosa ENSPFOG00000015741 I
ENSPMAG00000009377 Petromyzon marinus ENSPMAG00000009377 I
ENSPPYG00000016029 Pongo abelii ENSPPYG00000016029 I
ENSPSIG00000009562 Pelodiscus sinensis ENSPSIG00000009562 I
FOXI1 Pan troglodytes ENSPTRG00000017514 I
FOXI1 Pteropus vampyrus ENSPVAG00000005974 I
Foxi1 Rattus norvegicus ENSRNOG00000006293 I
ENSSHAG00000018578 Sarcophilus harrisii ENSSHAG00000018578 I
FOXI1 Sus scrofa ENSSSCG00000017009 I
ENSSTOG00000016524 Ictidomys tridecemlineatus ENSSTOG00000016524 I
FOXI1 Tupaia belangeri ENSTBEG00000000162 I
FOXI1 Taeniopygia guttata ENSTGUG00000001568 I
foxi3a Tetraodon nigroviridis ENSTNIG00000017058 I
foxi3a Takifugu rubripes ENSTRUG00000007060 I
FOXJ3 Takifugu rubripes ENSTRUG00000014404 I
FOXI1 Tursiops truncatus ENSTTRG00000002178 I
ENSXMAG00000010462 Xiphophorus maculatus ENSXMAG00000010462 I
estExt_fgeneshPB_pg.C_170198 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_170198 I
e_gw1.1.1225.1 Mucor circinelloides e_gw1.1.1225.1 I
fgeneshPB_pg.18__185 Phycomyces blakesleeanus fgeneshPB_pg.18__185 N
fgeneshPB_pg.6__357 Phycomyces blakesleeanus fgeneshPB_pg.6__357 I
Gfo_R011197 Geospiza fortis Gfo_R011197 I
GLOINDRAFT_349666 Rhizophagus irregularis GLOINDRAFT_349666 I
GLOINDRAFT_41548 Rhizophagus irregularis GLOINDRAFT_41548 I
GLOINDRAFT_82873 Rhizophagus irregularis GLOINDRAFT_82873 I
gw1.13.252.1 Mucor circinelloides gw1.13.252.1 I
gw1.9.461.1 Mucor circinelloides gw1.9.461.1 I
ISCW017832 Ixodes scapularis ISCW017832 I
L889_g29810 Steinernema feltiae L889_g29810 I
M896_121210 Ordospora colligata M896_121210 I
MCOS_0000744701 Mesocestoides corti MCOS_0000744701 I
ML154122a Mnemiopsis leidyi ML154122a I
Myotis_brandtii_FOXI1_10007902 Myotis brandtii Myotis_brandtii_FOXI1_10007902 I
Ogr15673 Ophisaurus gracilis Ogr15673 I
PFL1_06663 Pseudozyma flocculosa PFL1_06663 I
Pvit_09672 Pogona vitticeps Pvit_09672 I
RO3G_07238 Rhizopus oryzae RO3G_07238 I
Tal_R009461 Tyto alba Tal_R009461 I
TASK_0000593301 Taenia asiatica TASK_0000593301 I
TsM_000087000 Taenia solium TsM_000087000 I
foxi4.2 Xenopus tropicalis XB-GENE-487658 I
foxi1 Xenopus tropicalis XB-GENE-494125 I
foxi1.L Xenopus laevis XB-GENE-494129 I
foxi4.2.L Xenopus laevis XB-GENE-6252155 I