CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgeneshPB_pg.6__357
(
Phycomyces blakesleeanus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
fgeneshPB_pg.6__357
T189346_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXJ3
M03046_2.00
Homo sapiens
RTAAAVAA
TTBTTTAY
SELEX
Jolma et al.(2013)
FOXJ3_1
0.671
0.512
FOXJ3
M03047_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_2
0.671
0.512
FOXJ3
M03048_2.00
Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_3
0.671
0.512
FOXJ3
M02736_2.00
Homo sapiens
AAACAATAAACA
TGTTTATTGTTT
SELEX
Jolma et al.(2010)
FOXJ3_dimer
0.671
0.512
FOXJ3
M02737_2.00
Homo sapiens
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2010)
FOXJ3_monomer
0.671
0.512
FOXJ3
M04859_2.00
Homo sapiens
DYGTMAACAH
DTGTTKACRH
SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX
0.671
0.512
FOXJ3
M09098_2.00
Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A
0.671
0.512
FOXJ3
M04860_2.00
Homo sapiens
RYGTMAACAH
DTGTTKACRY
SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX
0.671
0.512
Foxj3
M00160_2.00
Mus musculus
NRTAAACAHN
NDTGTTTAYN
PBM
Badis et al.(2009)
Foxj3_0982
0.670
0.512
Foxj3
M01981_2.00
Mus musculus
VNHHAYANN
NNTRTDDNB
PBM
Weirauch et al.(2014)
pTH6591
0.670
0.512
Foxj3
M03055_2.00
Mus musculus
ACGGACACAAT
ATTGTGTCCGT
SELEX
Jolma et al.(2013)
Foxj3_1
0.670
0.512
Foxj3
M03056_2.00
Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
Foxj3_2
0.670
0.512
Foxj3
M03057_2.00
Mus musculus
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_3
0.670
0.512
Foxj3
M03058_2.00
Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_4
0.670
0.512
Foxj3
M09102_2.00
Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A
0.670
0.512
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshPB_pg.6__357
Forkhead
50
144
RPPFSYSSLIAQAILASEKERLTLQDIYKWITDNYPTLYNEGDTGWQNTIRHNLSLNKCFKKIPKSELDGWPSRGKGGYWVVDPKYLVKFKSGIF
Links
Other
Forkhead
family TFs
Other
Phycomyces blakesleeanus
TFs
78 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RO3G_07238
Rhizopus oryzae
RO3G_07238
I
0.777
gw1.6.928.1
Mucor circinelloides
gw1.6.928.1
I
0.777
GLOINDRAFT_41548
Rhizophagus irregularis
GLOINDRAFT_41548
I
0.717
Aqu1.223978
Amphimedon queenslandica
Aqu1.223978
I
0.687
RO3G_16764
Rhizopus oryzae
RO3G_16764
I
0.687
RO3G_14601
Rhizopus oryzae
RO3G_14601
I
0.683
DI09_49p90
Microsporidia sp
DI09_49p90
I
0.682
FOXJ3
Takifugu rubripes
ENSTRUG00000014404
I
0.674
ENSAMXG00000012362
Astyanax mexicanus
ENSAMXG00000012362
I
0.674
FOXJ3
Homo sapiens
ENSG00000198815
D
0.671
ENSONIG00000003923
Oreochromis niloticus
ENSONIG00000003923
I
0.670
FOXJ3
Ochotona princeps
ENSOPRG00000003174
I
0.670
ENSPFOG00000014598
Poecilia formosa
ENSPFOG00000014598
I
0.670
ENSPANG00000004657
Papio anubis
ENSPANG00000004657
I
0.670
ENSNLEG00000012288
Nomascus leucogenys
ENSNLEG00000012288
I
0.670
ENSMPUG00000014045
Mustela putorius furo
ENSMPUG00000014045
I
0.670
FOXJ3
Monodelphis domestica
ENSMODG00000017320
I
0.670
ENSPPYG00000001472
Pongo abelii
ENSPPYG00000001472
I
0.670
ENSOANG00000009728
Ornithorhynchus anatinus
ENSOANG00000009728
I
0.670
ENSOARG00000020401
Ovis aries
ENSOARG00000020401
I
0.670
FOXJ3
Oryctolagus cuniculus
ENSOCUG00000011647
I
0.670
foxj3
Tetraodon nigroviridis
ENSTNIG00000014781
I
0.670
M407DRAFT_46823
Tulasnella calospora
M407DRAFT_46823
N
0.670
ENSXMAG00000017058
Xiphophorus maculatus
ENSXMAG00000017058
I
0.670
ENSBTAP00000053827-D1
Bos grunniens
ENSBTAP00000053827-D1
I
0.670
Myotis_brandtii_FOXJ3_10016772
Myotis brandtii
Myotis_brandtii_FOXJ3_10016772
I
0.670
foxj3
Xenopus tropicalis
XB-GENE-481185
I
0.670
FOXJ3
Vicugna pacos
ENSVPAG00000005858
I
0.670
FOXJ3
Tursiops truncatus
ENSTTRG00000003605
I
0.670
ENSSHAG00000012097
Sarcophilus harrisii
ENSSHAG00000012097
I
0.670
Foxj3
Rattus norvegicus
ENSRNOG00000061851
I
0.670
ENSTNIG00000001292
Tetraodon nigroviridis
ENSTNIG00000001292
I
0.670
FOXJ3
Macaca mulatta
ENSMMUG00000014138
I
0.670
foxj3
Takifugu rubripes
ENSTRUG00000014515
I
0.670
FOXJ3
Pan troglodytes
ENSPTRG00000000606
I
0.670
Foxj3
Mus musculus
ENSMUSG00000032998
D
0.670
foxj3
Danio rerio
ENSDARG00000075774
I
0.670
FOXJ3
Dasypus novemcinctus
ENSDNOG00000008585
I
0.670
Foxj3
Dipodomys ordii
ENSDORG00000015838
I
0.670
FOXJ3
Equus caballus
ENSECAG00000008665
I
0.670
FOXJ3
Myotis lucifugus
ENSMLUG00000005770
I
0.670
ENSCSAG00000001162
Chlorocebus sabaeus
ENSCSAG00000001162
I
0.670
FOXJ3
Bos taurus
ENSBTAG00000015887
I
0.670
FOXJ3
Canis familiaris
ENSCAFG00000002563
I
0.670
FOXJ3
Callithrix jacchus
ENSCJAG00000003088
I
0.670
ENSCPOG00000024703
Cavia porcellus
ENSCPOG00000024703
I
0.670
FOXJ3
Felis catus
ENSFCAG00000026568
I
0.670
FOXJ3
Echinops telfairi
ENSETEG00000014454
I
0.670
ENSLOCG00000001575
Lepisosteus oculatus
ENSLOCG00000001575
I
0.670
FOXJ3
Loxodonta africana
ENSLAFG00000017663
I
0.670
ENSMEUG00000005169
Macropus eugenii
ENSMEUG00000005169
I
0.670
ENSAMEG00000000591
Ailuropoda melanoleuca
ENSAMEG00000000591
I
0.670
ENSMICG00000010441
Microcebus murinus
ENSMICG00000010441
I
0.670
ENSAMXG00000016940
Astyanax mexicanus
ENSAMXG00000016940
I
0.670
ENSLACG00000008649
Latimeria chalumnae
ENSLACG00000008649
I
0.670
FOXJ3
Gorilla gorilla
ENSGGOG00000013618
I
0.670
foxj3
Gasterosteus aculeatus
ENSGACG00000007398
I
0.670
ENSGMOG00000001764
Gadus morhua
ENSGMOG00000001764
I
0.670
Afo_R011902
Aptenodytes forsteri
Afo_R011902
I
0.669
ENSAPLG00000012296
Anas platyrhynchos
ENSAPLG00000012296
I
0.669
Aan_R013126
Calypte anna
Aan_R013126
I
0.669
Brh_R008138
Buceros rhinoceros
Brh_R008138
I
0.669
Tal_R009461
Tyto alba
Tal_R009461
I
0.669
Cmyd_10020111
Chelonia mydas
Cmyd_10020111
I
0.669
Alligator_sinensis_CCG016013.1
Alligator sinensis
Alligator_sinensis_CCG016013.1
I
0.669
foxi3b
Danio rerio
ENSDARG00000009550
I
0.669
FOXI1
Gallus gallus
ENSGALG00000002105
I
0.669
FOXI1
Meleagris gallopavo
ENSMGAG00000002015
I
0.669
ENSPMAG00000009377
Petromyzon marinus
ENSPMAG00000009377
I
0.669
ENSPSIG00000009562
Pelodiscus sinensis
ENSPSIG00000009562
I
0.669
RO3G_13161
Rhizopus oryzae
RO3G_13161
I
0.667
GB48110
Apis mellifera
GB48110
I
0.667
HNAJ_0000565501
Hymenolepis nana
HNAJ_0000565501
I
0.665
BGLB002288
Biomphalaria glabrata
BGLB002288
I
0.664
PFL1_06663
Pseudozyma flocculosa
PFL1_06663
I
0.664
H311_02609
Anncaliia algerae
H311_02609
I
0.664
foxi3a
Danio rerio
ENSDARG00000055926
I
0.664
GH12162
Drosophila grimshawi
FBgn0119641
I
0.664